Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Gm4899-201ENSMUST00000178708 719 ntBASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.82■□□□□ 0.12
Syne3Q4FZC9 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Best4-ps-201ENSMUST00000129783 1380 ntBASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.82■□□□□ 0.12
Syne3Q4FZC9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Syne3Q4FZC9 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Syne3Q4FZC9 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne3Q4FZC9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne3Q4FZC9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne3Q4FZC9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Syne3Q4FZC9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne3Q4FZC9 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.81■□□□□ 0.12
Syne3Q4FZC9 Psmb5-202ENSMUST00000227257 622 ntBASIC15.81■□□□□ 0.12
Syne3Q4FZC9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.81■□□□□ 0.12
Syne3Q4FZC9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne3Q4FZC9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne3Q4FZC9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne3Q4FZC9 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Syne3Q4FZC9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne3Q4FZC9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne3Q4FZC9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Syne3Q4FZC9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Syne3Q4FZC9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Syne3Q4FZC9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne3Q4FZC9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne3Q4FZC9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne3Q4FZC9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Syne3Q4FZC9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Syne3Q4FZC9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Gm14140-201ENSMUST00000119999 995 ntBASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Gm10499-201ENSMUST00000174094 934 ntBASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Gm43514-201ENSMUST00000198852 424 ntBASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Gm5364-201ENSMUST00000216789 889 ntBASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Syne3Q4FZC9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.8■□□□□ 0.12
Syne3Q4FZC9 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne3Q4FZC9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Syne3Q4FZC9 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne3Q4FZC9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne3Q4FZC9 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Syne3Q4FZC9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne3Q4FZC9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Syne3Q4FZC9 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne3Q4FZC9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne3Q4FZC9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.79■□□□□ 0.12
Syne3Q4FZC9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne3Q4FZC9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne3Q4FZC9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Syne3Q4FZC9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Syne3Q4FZC9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Syne3Q4FZC9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Syne3Q4FZC9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.79■□□□□ 0.12
Syne3Q4FZC9 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.79■□□□□ 0.12
Syne3Q4FZC9 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne3Q4FZC9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Syne3Q4FZC9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.79■□□□□ 0.12
Syne3Q4FZC9 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne3Q4FZC9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Syne3Q4FZC9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Syne3Q4FZC9 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms