Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shank3Q4ACU6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Shank3Q4ACU6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Shank3Q4ACU6 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Shank3Q4ACU6 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Shank3Q4ACU6 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Shank3Q4ACU6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Shank3Q4ACU6 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC18.2■□□□□ 0.5
Shank3Q4ACU6 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Shank3Q4ACU6 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Shank3Q4ACU6 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC18.2■□□□□ 0.5
Shank3Q4ACU6 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Shank3Q4ACU6 AC110817.1-201ENSMUST00000225706 605 ntBASIC18.2■□□□□ 0.5
Shank3Q4ACU6 AC154806.6-201ENSMUST00000228192 202 ntBASIC18.2■□□□□ 0.5
Shank3Q4ACU6 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Shank3Q4ACU6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Shank3Q4ACU6 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Shank3Q4ACU6 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shank3Q4ACU6 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Shank3Q4ACU6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Shank3Q4ACU6 Gm8775-201ENSMUST00000170943 1327 ntBASIC18.2■□□□□ 0.5
Shank3Q4ACU6 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shank3Q4ACU6 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shank3Q4ACU6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shank3Q4ACU6 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
Shank3Q4ACU6 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shank3Q4ACU6 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC18.2■□□□□ 0.5
Shank3Q4ACU6 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shank3Q4ACU6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Shank3Q4ACU6 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.2■□□□□ 0.5
Shank3Q4ACU6 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Shank3Q4ACU6 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Shank3Q4ACU6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Shank3Q4ACU6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shank3Q4ACU6 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shank3Q4ACU6 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shank3Q4ACU6 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC18.19■□□□□ 0.5
Shank3Q4ACU6 Gm17420-201ENSMUST00000164753 153 ntBASIC18.19■□□□□ 0.5
Shank3Q4ACU6 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC18.19■□□□□ 0.5
Shank3Q4ACU6 AC122459.1-201ENSMUST00000228373 885 ntBASIC18.19■□□□□ 0.5
Shank3Q4ACU6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Shank3Q4ACU6 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Shank3Q4ACU6 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC18.19■□□□□ 0.5
Shank3Q4ACU6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Shank3Q4ACU6 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shank3Q4ACU6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shank3Q4ACU6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.19■□□□□ 0.5
Shank3Q4ACU6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shank3Q4ACU6 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC18.19■□□□□ 0.5
Shank3Q4ACU6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Shank3Q4ACU6 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Shank3Q4ACU6 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Mir1247-201ENSMUST00000116706 82 ntBASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Gm12742-201ENSMUST00000117326 410 ntBASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Ighv1-25-201ENSMUST00000195638 345 ntBASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Gm17795-201ENSMUST00000214505 757 ntBASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Gm18307-201ENSMUST00000206864 949 ntBASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shank3Q4ACU6 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Shank3Q4ACU6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Shank3Q4ACU6 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms