Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Rprl3-201ENSMUST00000157400 290 ntBASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Gm6345-202ENSMUST00000180900 204 ntBASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Cnga4Q3UW12 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Gm15794-201ENSMUST00000120182 631 ntBASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Gm44454-201ENSMUST00000198541 138 ntBASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cnga4Q3UW12 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Cnga4Q3UW12 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cnga4Q3UW12 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cnga4Q3UW12 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cnga4Q3UW12 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cnga4Q3UW12 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cnga4Q3UW12 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Cnga4Q3UW12 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cnga4Q3UW12 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cnga4Q3UW12 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Cnga4Q3UW12 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cnga4Q3UW12 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cnga4Q3UW12 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cnga4Q3UW12 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cnga4Q3UW12 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cnga4Q3UW12 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cnga4Q3UW12 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cnga4Q3UW12 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cnga4Q3UW12 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cnga4Q3UW12 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.1■□□□□ 0.01
Cnga4Q3UW12 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms