Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkl5Q3UTQ8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cdkl5Q3UTQ8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Cdkl5Q3UTQ8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkl5Q3UTQ8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.24■□□□□ 0.35
Cdkl5Q3UTQ8 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkl5Q3UTQ8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cdkl5Q3UTQ8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkl5Q3UTQ8 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.24■□□□□ 0.35
Cdkl5Q3UTQ8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkl5Q3UTQ8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Cdkl5Q3UTQ8 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkl5Q3UTQ8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkl5Q3UTQ8 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cdkl5Q3UTQ8 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkl5Q3UTQ8 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cdkl5Q3UTQ8 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkl5Q3UTQ8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cdkl5Q3UTQ8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkl5Q3UTQ8 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkl5Q3UTQ8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Cdkl5Q3UTQ8 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkl5Q3UTQ8 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkl5Q3UTQ8 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
Cdkl5Q3UTQ8 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cdkl5Q3UTQ8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkl5Q3UTQ8 Gm1401-201ENSMUST00000122048 772 ntBASIC17.23■□□□□ 0.35
Cdkl5Q3UTQ8 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkl5Q3UTQ8 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.23■□□□□ 0.35
Cdkl5Q3UTQ8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkl5Q3UTQ8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.23■□□□□ 0.35
Cdkl5Q3UTQ8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.23■□□□□ 0.35
Cdkl5Q3UTQ8 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkl5Q3UTQ8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkl5Q3UTQ8 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.23■□□□□ 0.35
Cdkl5Q3UTQ8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkl5Q3UTQ8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkl5Q3UTQ8 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkl5Q3UTQ8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkl5Q3UTQ8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cdkl5Q3UTQ8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Gm8096-201ENSMUST00000209921 1591 ntBASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Cdkl5Q3UTQ8 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Thap2-203ENSMUST00000218989 527 ntBASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cdkl5Q3UTQ8 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cdkl5Q3UTQ8 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cdkl5Q3UTQ8 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cdkl5Q3UTQ8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cdkl5Q3UTQ8 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cdkl5Q3UTQ8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms