Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Znf48Q3US17 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Znf48Q3US17 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Znf48Q3US17 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Znf48Q3US17 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.35□□□□□ -0.43
Znf48Q3US17 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.35□□□□□ -0.43
Znf48Q3US17 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.35□□□□□ -0.43
Znf48Q3US17 Mir6956-201ENSMUST00000183598 62 ntBASIC12.35□□□□□ -0.43
Znf48Q3US17 Gm36967-201ENSMUST00000193814 266 ntBASIC12.35□□□□□ -0.43
Znf48Q3US17 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.35□□□□□ -0.43
Znf48Q3US17 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.35□□□□□ -0.43
Znf48Q3US17 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC12.35□□□□□ -0.43
Znf48Q3US17 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.35□□□□□ -0.43
Znf48Q3US17 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Znf48Q3US17 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.35□□□□□ -0.43
Znf48Q3US17 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.35□□□□□ -0.43
Znf48Q3US17 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Znf48Q3US17 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.34□□□□□ -0.43
Znf48Q3US17 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.34□□□□□ -0.43
Znf48Q3US17 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Znf48Q3US17 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Znf48Q3US17 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Znf48Q3US17 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Znf48Q3US17 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC12.34□□□□□ -0.43
Znf48Q3US17 Gm27321-201ENSMUST00000185021 205 ntBASIC12.34□□□□□ -0.43
Znf48Q3US17 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.34□□□□□ -0.43
Znf48Q3US17 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.34□□□□□ -0.43
Znf48Q3US17 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
Znf48Q3US17 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Znf48Q3US17 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Znf48Q3US17 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.34□□□□□ -0.43
Znf48Q3US17 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.34□□□□□ -0.43
Znf48Q3US17 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Znf48Q3US17 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
Znf48Q3US17 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Znf48Q3US17 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Znf48Q3US17 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Znf48Q3US17 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.33□□□□□ -0.44
Znf48Q3US17 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.33□□□□□ -0.44
Znf48Q3US17 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Znf48Q3US17 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Znf48Q3US17 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
Znf48Q3US17 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Znf48Q3US17 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.33□□□□□ -0.44
Znf48Q3US17 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Znf48Q3US17 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC12.33□□□□□ -0.44
Znf48Q3US17 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms