Protein–RNA interactions for Protein: Q3URK1

Ccdc190, Coiled-coil domain-containing protein 190, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc190Q3URK1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.13□□□□□ -0.31
Ccdc190Q3URK1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Ccdc190Q3URK1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.13□□□□□ -0.31
Ccdc190Q3URK1 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc190Q3URK1 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccdc190Q3URK1 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc190Q3URK1 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc190Q3URK1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc190Q3URK1 Matn2-206ENSMUST00000228570 2798 ntBASIC13.13□□□□□ -0.31
Ccdc190Q3URK1 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc190Q3URK1 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc190Q3URK1 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc190Q3URK1 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Gm7284-201ENSMUST00000131667 944 ntBASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc190Q3URK1 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Gm25406-201ENSMUST00000157599 105 ntBASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Gm44454-201ENSMUST00000198541 138 ntBASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc190Q3URK1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc190Q3URK1 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc190Q3URK1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Ccdc190Q3URK1 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc190Q3URK1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.1□□□□□ -0.31
Ccdc190Q3URK1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.1□□□□□ -0.31
Ccdc190Q3URK1 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ccdc190Q3URK1 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc190Q3URK1 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc190Q3URK1 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc190Q3URK1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ccdc190Q3URK1 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms