Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Gm15483-201ENSMUST00000120338 456 ntBASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nhlrc4Q3UP44 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Gm8749-201ENSMUST00000117737 331 ntBASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nhlrc4Q3UP44 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.65□□□□□ -0.22
Nhlrc4Q3UP44 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Nhlrc4Q3UP44 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Nhlrc4Q3UP44 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Nhlrc4Q3UP44 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms