Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nkx6-3Q3UHX8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-3Q3UHX8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
Nkx6-3Q3UHX8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Nkx6-3Q3UHX8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Nkx6-3Q3UHX8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-3Q3UHX8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-3Q3UHX8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-3Q3UHX8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-3Q3UHX8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-3Q3UHX8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Nkx6-3Q3UHX8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-3Q3UHX8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.02□□□□□ -0.16
Nkx6-3Q3UHX8 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx6-3Q3UHX8 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx6-3Q3UHX8 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.02□□□□□ -0.17
Nkx6-3Q3UHX8 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx6-3Q3UHX8 Gm25287-201ENSMUST00000103846 110 ntBASIC14.02□□□□□ -0.17
Nkx6-3Q3UHX8 Gm22918-201ENSMUST00000103855 110 ntBASIC14.02□□□□□ -0.17
Nkx6-3Q3UHX8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx6-3Q3UHX8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.02□□□□□ -0.17
Nkx6-3Q3UHX8 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.02□□□□□ -0.17
Nkx6-3Q3UHX8 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx6-3Q3UHX8 Gm2451-201ENSMUST00000199447 999 ntBASIC14.02□□□□□ -0.17
Nkx6-3Q3UHX8 Gm10290-201ENSMUST00000200451 999 ntBASIC14.02□□□□□ -0.17
Nkx6-3Q3UHX8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Nkx6-3Q3UHX8 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.02□□□□□ -0.17
Nkx6-3Q3UHX8 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx6-3Q3UHX8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx6-3Q3UHX8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.02□□□□□ -0.17
Nkx6-3Q3UHX8 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx6-3Q3UHX8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx6-3Q3UHX8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Nkx6-3Q3UHX8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx6-3Q3UHX8 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx6-3Q3UHX8 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm22065-201ENSMUST00000103753 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm22066-201ENSMUST00000103761 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm24932-201ENSMUST00000103763 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm24115-201ENSMUST00000103799 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm22190-201ENSMUST00000103827 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm22191-201ENSMUST00000103831 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm24721-201ENSMUST00000103849 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm28018-201ENSMUST00000103869 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm26399-201ENSMUST00000103937 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm25349-201ENSMUST00000177728 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm23616-201ENSMUST00000177797 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm25871-201ENSMUST00000177816 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm24752-201ENSMUST00000178240 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm24496-201ENSMUST00000178287 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm25649-201ENSMUST00000178476 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm25548-201ENSMUST00000178681 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm23147-201ENSMUST00000178841 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm26095-201ENSMUST00000179270 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm22171-201ENSMUST00000179283 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm23936-201ENSMUST00000179354 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm22619-201ENSMUST00000179516 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm25255-201ENSMUST00000179579 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm24755-201ENSMUST00000179691 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm26506-201ENSMUST00000179692 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm25086-201ENSMUST00000179931 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm23243-201ENSMUST00000180047 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm24659-201ENSMUST00000180212 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm24169-201ENSMUST00000180244 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm23689-201ENSMUST00000180354 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm27359-201ENSMUST00000184153 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm27785-201ENSMUST00000184268 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm27466-201ENSMUST00000184396 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm27703-201ENSMUST00000184836 110 ntBASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.01□□□□□ -0.17
Nkx6-3Q3UHX8 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms