Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Gm12928-201ENSMUST00000117115 573 ntBASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Gm12585-201ENSMUST00000117307 290 ntBASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Gm43133-201ENSMUST00000197472 463 ntBASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Spg11Q3UHA3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Spg11Q3UHA3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.57□□□□□ -0.24
Spg11Q3UHA3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Spg11Q3UHA3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Spg11Q3UHA3 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Spg11Q3UHA3 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Spg11Q3UHA3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Spg11Q3UHA3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Spg11Q3UHA3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.57□□□□□ -0.24
Spg11Q3UHA3 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.57□□□□□ -0.24
Spg11Q3UHA3 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.57□□□□□ -0.24
Spg11Q3UHA3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Spg11Q3UHA3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Spg11Q3UHA3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Spg11Q3UHA3 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.57□□□□□ -0.24
Spg11Q3UHA3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.57□□□□□ -0.24
Spg11Q3UHA3 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Spg11Q3UHA3 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Spg11Q3UHA3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Spg11Q3UHA3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Spg11Q3UHA3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Gm2383-201ENSMUST00000181461 807 ntBASIC13.56□□□□□ -0.24
Spg11Q3UHA3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Spg11Q3UHA3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.55□□□□□ -0.24
Spg11Q3UHA3 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Mir6979-201ENSMUST00000183927 56 ntBASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Gm8969-201ENSMUST00000199694 526 ntBASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Spg11Q3UHA3 Gm19309-201ENSMUST00000218295 205 ntBASIC13.55□□□□□ -0.24
Spg11Q3UHA3 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms