Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Gm43275-201ENSMUST00000202053 1020 ntBASIC7.75□□□□□ -1.17
Ush2AQ2QI47 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Gm24830-201ENSMUST00000102024 166 ntBASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Gm13570-201ENSMUST00000140763 309 ntBASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Gm25890-201ENSMUST00000177643 165 ntBASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Rnu1b2-201ENSMUST00000178073 165 ntBASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Rnu1b1-201ENSMUST00000178250 165 ntBASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Gm22614-201ENSMUST00000178300 165 ntBASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Gm42779-201ENSMUST00000198807 406 ntBASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Gm6983-201ENSMUST00000214912 628 ntBASIC7.75□□□□□ -1.17
Ush2AQ2QI47 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 CT025533.2-201ENSMUST00000228715 1248 ntBASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Gm22042-201ENSMUST00000082989 165 ntBASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Gm26232-201ENSMUST00000083360 166 ntBASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Gm24136-201ENSMUST00000083374 165 ntBASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Rnu1b6-201ENSMUST00000083839 166 ntBASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Gm26110-201ENSMUST00000083971 165 ntBASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Ush2AQ2QI47 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Gm7029-201ENSMUST00000173226 450 ntBASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Dmtn-207ENSMUST00000228001 2437 ntBASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Rn7s6-201ENSMUST00000175005 291 ntBASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Gm6283-201ENSMUST00000182369 1000 ntBASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Gm5869-201ENSMUST00000200248 1257 ntBASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Gm21038-201ENSMUST00000222205 1383 ntBASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Gm18393-201ENSMUST00000208349 1131 ntBASIC7.74□□□□□ -1.17
Ush2AQ2QI47 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Mir686-201ENSMUST00000102174 109 ntBASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Gm37812-201ENSMUST00000195216 2475 ntBASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Ush2AQ2QI47 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC7.73□□□□□ -1.17
Ush2AQ2QI47 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC7.73□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms