Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Gm37748-201ENSMUST00000194379 1140 ntBASIC17.6■□□□□ 0.41
Chrna5Q2MKA5 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chrna5Q2MKA5 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Chrna5Q2MKA5 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chrna5Q2MKA5 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chrna5Q2MKA5 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.6■□□□□ 0.41
Chrna5Q2MKA5 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chrna5Q2MKA5 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna5Q2MKA5 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna5Q2MKA5 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna5Q2MKA5 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna5Q2MKA5 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.59■□□□□ 0.41
Chrna5Q2MKA5 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna5Q2MKA5 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna5Q2MKA5 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Chrna5Q2MKA5 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna5Q2MKA5 Gm11918-201ENSMUST00000121660 179 ntBASIC17.59■□□□□ 0.41
Chrna5Q2MKA5 Gm6266-201ENSMUST00000203844 806 ntBASIC17.59■□□□□ 0.41
Chrna5Q2MKA5 Gm18062-201ENSMUST00000208020 547 ntBASIC17.59■□□□□ 0.41
Chrna5Q2MKA5 Gm18055-201ENSMUST00000208254 547 ntBASIC17.59■□□□□ 0.41
Chrna5Q2MKA5 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Chrna5Q2MKA5 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna5Q2MKA5 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna5Q2MKA5 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna5Q2MKA5 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna5Q2MKA5 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna5Q2MKA5 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.59■□□□□ 0.41
Chrna5Q2MKA5 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna5Q2MKA5 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chrna5Q2MKA5 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chrna5Q2MKA5 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Chrna5Q2MKA5 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Chrna5Q2MKA5 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chrna5Q2MKA5 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chrna5Q2MKA5 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chrna5Q2MKA5 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna5Q2MKA5 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna5Q2MKA5 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC17.58■□□□□ 0.4
Chrna5Q2MKA5 Gm6944-201ENSMUST00000182449 1006 ntBASIC17.58■□□□□ 0.4
Chrna5Q2MKA5 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC17.58■□□□□ 0.4
Chrna5Q2MKA5 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Chrna5Q2MKA5 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC17.58■□□□□ 0.4
Chrna5Q2MKA5 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Chrna5Q2MKA5 Mir125a-201ENSMUST00000083545 68 ntBASIC17.58■□□□□ 0.4
Chrna5Q2MKA5 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Chrna5Q2MKA5 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna5Q2MKA5 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Chrna5Q2MKA5 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna5Q2MKA5 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna5Q2MKA5 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chrna5Q2MKA5 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna5Q2MKA5 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna5Q2MKA5 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna5Q2MKA5 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna5Q2MKA5 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna5Q2MKA5 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna5Q2MKA5 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna5Q2MKA5 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna5Q2MKA5 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Chrna5Q2MKA5 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC17.57■□□□□ 0.4
Chrna5Q2MKA5 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna5Q2MKA5 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna5Q2MKA5 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Chrna5Q2MKA5 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna5Q2MKA5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Chrna5Q2MKA5 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna5Q2MKA5 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna5Q2MKA5 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
Chrna5Q2MKA5 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna5Q2MKA5 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna5Q2MKA5 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chrna5Q2MKA5 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Mir6392-201ENSMUST00000184924 108 ntBASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Gm37230-201ENSMUST00000194491 818 ntBASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Gm10313-201ENSMUST00000095320 1002 ntBASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Mxra8os-201ENSMUST00000097740 687 ntBASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chrna5Q2MKA5 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms