Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim72Q1XH17 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trim72Q1XH17 Mir8117-201ENSMUST00000184773 107 ntBASIC15.86■□□□□ 0.13
Trim72Q1XH17 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.86■□□□□ 0.13
Trim72Q1XH17 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim72Q1XH17 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim72Q1XH17 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim72Q1XH17 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trim72Q1XH17 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trim72Q1XH17 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim72Q1XH17 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim72Q1XH17 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim72Q1XH17 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trim72Q1XH17 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Trim72Q1XH17 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trim72Q1XH17 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.85■□□□□ 0.13
Trim72Q1XH17 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Gm16026-204ENSMUST00000162652 683 ntBASIC15.85■□□□□ 0.13
Trim72Q1XH17 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.85■□□□□ 0.13
Trim72Q1XH17 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim72Q1XH17 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.84■□□□□ 0.13
Trim72Q1XH17 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Gm27301-201ENSMUST00000184012 127 ntBASIC15.84■□□□□ 0.13
Trim72Q1XH17 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.84■□□□□ 0.13
Trim72Q1XH17 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim72Q1XH17 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim72Q1XH17 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
Trim72Q1XH17 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trim72Q1XH17 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim72Q1XH17 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trim72Q1XH17 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim72Q1XH17 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim72Q1XH17 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trim72Q1XH17 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trim72Q1XH17 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim72Q1XH17 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.83■□□□□ 0.12
Trim72Q1XH17 Gm12260-201ENSMUST00000122447 411 ntBASIC15.83■□□□□ 0.12
Trim72Q1XH17 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
Trim72Q1XH17 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms