Protein–RNA interactions for Protein: Q0PD08

Rab42, Ras-related protein Rab-42, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab42Q0PD08 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rab42Q0PD08 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Gm27742-201ENSMUST00000184667 60 ntBASIC13.2□□□□□ -0.3
Rab42Q0PD08 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.2□□□□□ -0.3
Rab42Q0PD08 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab42Q0PD08 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Rprl3-201ENSMUST00000157400 290 ntBASIC13.19□□□□□ -0.3
Rab42Q0PD08 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.19□□□□□ -0.3
Rab42Q0PD08 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.19□□□□□ -0.3
Rab42Q0PD08 Gm27704-201ENSMUST00000185094 107 ntBASIC13.19□□□□□ -0.3
Rab42Q0PD08 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.19□□□□□ -0.3
Rab42Q0PD08 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rab42Q0PD08 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.18□□□□□ -0.3
Rab42Q0PD08 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab42Q0PD08 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.18□□□□□ -0.3
Rab42Q0PD08 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab42Q0PD08 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.18□□□□□ -0.3
Rab42Q0PD08 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab42Q0PD08 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rab42Q0PD08 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rab42Q0PD08 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab42Q0PD08 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rab42Q0PD08 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Rab42Q0PD08 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rab42Q0PD08 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab42Q0PD08 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab42Q0PD08 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rab42Q0PD08 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.17□□□□□ -0.3
Rab42Q0PD08 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Rab42Q0PD08 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms