Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Tff1Q08423 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Tff1Q08423 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.38□□□□□ -0.43
Tff1Q08423 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Tff1Q08423 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Tff1Q08423 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Tff1Q08423 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.38□□□□□ -0.43
Tff1Q08423 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Tff1Q08423 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.37□□□□□ -0.43
Tff1Q08423 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.37□□□□□ -0.43
Tff1Q08423 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.37□□□□□ -0.43
Tff1Q08423 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Tff1Q08423 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.37□□□□□ -0.43
Tff1Q08423 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Tff1Q08423 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.37□□□□□ -0.43
Tff1Q08423 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.37□□□□□ -0.43
Tff1Q08423 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Tff1Q08423 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.37□□□□□ -0.43
Tff1Q08423 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.37□□□□□ -0.43
Tff1Q08423 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Tff1Q08423 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.37□□□□□ -0.43
Tff1Q08423 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.37□□□□□ -0.43
Tff1Q08423 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Tff1Q08423 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.37□□□□□ -0.43
Tff1Q08423 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Tff1Q08423 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tff1Q08423 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.36□□□□□ -0.43
Tff1Q08423 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tff1Q08423 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Tff1Q08423 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.36□□□□□ -0.43
Tff1Q08423 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tff1Q08423 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Tff1Q08423 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tff1Q08423 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tff1Q08423 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tff1Q08423 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.36□□□□□ -0.43
Tff1Q08423 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Tff1Q08423 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tff1Q08423 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tff1Q08423 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tff1Q08423 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tff1Q08423 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Tff1Q08423 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tff1Q08423 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Tff1Q08423 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tff1Q08423 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tff1Q08423 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tff1Q08423 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tff1Q08423 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tff1Q08423 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tff1Q08423 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Tff1Q08423 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Tff1Q08423 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Tff1Q08423 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms