Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.07□□□□□ -0.16
Nkx3-2P97503 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Rpph1-201ENSMUST00000175096 319 ntBASIC14.07□□□□□ -0.16
Nkx3-2P97503 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx3-2P97503 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nkx3-2P97503 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.07□□□□□ -0.16
Nkx3-2P97503 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
Nkx3-2P97503 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Nkx3-2P97503 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.07□□□□□ -0.16
Nkx3-2P97503 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nkx3-2P97503 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.07□□□□□ -0.16
Nkx3-2P97503 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.06□□□□□ -0.16
Nkx3-2P97503 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.06□□□□□ -0.16
Nkx3-2P97503 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.06□□□□□ -0.16
Nkx3-2P97503 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx3-2P97503 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Gm16198-201ENSMUST00000118766 670 ntBASIC14.05□□□□□ -0.16
Nkx3-2P97503 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx3-2P97503 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms