Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Npas1P97459 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.51□□□□□ -0.41
Npas1P97459 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Npas1P97459 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npas1P97459 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npas1P97459 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npas1P97459 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Npas1P97459 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Npas1P97459 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Npas1P97459 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.51□□□□□ -0.41
Npas1P97459 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Npas1P97459 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npas1P97459 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npas1P97459 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
Npas1P97459 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npas1P97459 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Npas1P97459 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npas1P97459 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npas1P97459 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npas1P97459 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Npas1P97459 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npas1P97459 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npas1P97459 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npas1P97459 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Npas1P97459 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npas1P97459 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npas1P97459 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Npas1P97459 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Npas1P97459 Gm15565-201ENSMUST00000118890 427 ntBASIC12.5□□□□□ -0.41
Npas1P97459 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.5□□□□□ -0.41
Npas1P97459 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.5□□□□□ -0.41
Npas1P97459 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Npas1P97459 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.5□□□□□ -0.41
Npas1P97459 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npas1P97459 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npas1P97459 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.5□□□□□ -0.41
Npas1P97459 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.5□□□□□ -0.41
Npas1P97459 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.5□□□□□ -0.41
Npas1P97459 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npas1P97459 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Npas1P97459 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Npas1P97459 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.5□□□□□ -0.41
Npas1P97459 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npas1P97459 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npas1P97459 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Npas1P97459 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Npas1P97459 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npas1P97459 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Npas1P97459 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Npas1P97459 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npas1P97459 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npas1P97459 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npas1P97459 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Npas1P97459 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Npas1P97459 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.49□□□□□ -0.41
Npas1P97459 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Npas1P97459 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Npas1P97459 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.49□□□□□ -0.41
Npas1P97459 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Npas1P97459 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Npas1P97459 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Npas1P97459 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Npas1P97459 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Npas1P97459 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Npas1P97459 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.48□□□□□ -0.41
Npas1P97459 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Npas1P97459 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Npas1P97459 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.48□□□□□ -0.41
Npas1P97459 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Npas1P97459 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Npas1P97459 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.48□□□□□ -0.41
Npas1P97459 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Npas1P97459 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Npas1P97459 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Npas1P97459 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Npas1P97459 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.48□□□□□ -0.41
Npas1P97459 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms