Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43cP86449 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43cP86449 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43cP86449 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43cP86449 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43cP86449 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43cP86449 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43cP86449 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.17■□□□□ 0.18
Trim43cP86449 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43cP86449 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trim43cP86449 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43cP86449 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43cP86449 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43cP86449 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43cP86449 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43cP86449 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43cP86449 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
Trim43cP86449 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43cP86449 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43cP86449 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43cP86449 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trim43cP86449 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43cP86449 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43cP86449 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43cP86449 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC16.16■□□□□ 0.18
Trim43cP86449 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.16■□□□□ 0.18
Trim43cP86449 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.16■□□□□ 0.18
Trim43cP86449 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43cP86449 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43cP86449 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43cP86449 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Trim43cP86449 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trim43cP86449 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trim43cP86449 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.16■□□□□ 0.18
Trim43cP86449 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.16■□□□□ 0.18
Trim43cP86449 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43cP86449 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43cP86449 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.16■□□□□ 0.18
Trim43cP86449 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43cP86449 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.16■□□□□ 0.18
Trim43cP86449 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43cP86449 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim43cP86449 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43cP86449 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43cP86449 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43cP86449 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43cP86449 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43cP86449 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43cP86449 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43cP86449 Gm13464-201ENSMUST00000119418 935 ntBASIC16.15■□□□□ 0.18
Trim43cP86449 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trim43cP86449 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.15■□□□□ 0.18
Trim43cP86449 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.15■□□□□ 0.18
Trim43cP86449 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.15■□□□□ 0.18
Trim43cP86449 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43cP86449 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43cP86449 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trim43cP86449 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43cP86449 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43cP86449 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43cP86449 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43cP86449 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.15■□□□□ 0.18
Trim43cP86449 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43cP86449 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim43cP86449 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trim43cP86449 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trim43cP86449 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.14■□□□□ 0.18
Trim43cP86449 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trim43cP86449 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trim43cP86449 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43cP86449 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trim43cP86449 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43cP86449 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43cP86449 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43cP86449 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trim43cP86449 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43cP86449 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim43cP86449 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43cP86449 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43cP86449 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43cP86449 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43cP86449 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43cP86449 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trim43cP86449 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43cP86449 Gm25911-201ENSMUST00000157621 56 ntBASIC16.14■□□□□ 0.17
Trim43cP86449 Gm23547-201ENSMUST00000158210 271 ntBASIC16.14■□□□□ 0.17
Trim43cP86449 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43cP86449 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.14■□□□□ 0.17
Trim43cP86449 Gm6443-201ENSMUST00000203599 874 ntBASIC16.14■□□□□ 0.17
Trim43cP86449 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.14■□□□□ 0.17
Trim43cP86449 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43cP86449 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43cP86449 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43cP86449 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43cP86449 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43cP86449 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43cP86449 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trim43cP86449 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim43cP86449 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trim43cP86449 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms