Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43bP86448 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43bP86448 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43bP86448 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trim43bP86448 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43bP86448 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43bP86448 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43bP86448 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43bP86448 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43bP86448 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trim43bP86448 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim43bP86448 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43bP86448 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43bP86448 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43bP86448 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.32■□□□□ 0.04
Trim43bP86448 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43bP86448 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trim43bP86448 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43bP86448 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43bP86448 Gm14722-201ENSMUST00000118943 689 ntBASIC15.32■□□□□ 0.04
Trim43bP86448 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43bP86448 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.32■□□□□ 0.04
Trim43bP86448 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.32■□□□□ 0.04
Trim43bP86448 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
Trim43bP86448 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43bP86448 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43bP86448 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim43bP86448 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43bP86448 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.32■□□□□ 0.04
Trim43bP86448 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43bP86448 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43bP86448 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43bP86448 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Trim43bP86448 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43bP86448 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43bP86448 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim43bP86448 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43bP86448 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trim43bP86448 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim43bP86448 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim43bP86448 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.31■□□□□ 0.04
Trim43bP86448 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43bP86448 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43bP86448 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim43bP86448 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43bP86448 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim43bP86448 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.31■□□□□ 0.04
Trim43bP86448 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43bP86448 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43bP86448 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43bP86448 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43bP86448 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43bP86448 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.31■□□□□ 0.04
Trim43bP86448 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Trim43bP86448 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43bP86448 Gm7222-201ENSMUST00000117512 906 ntBASIC15.31■□□□□ 0.04
Trim43bP86448 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.31■□□□□ 0.04
Trim43bP86448 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Trim43bP86448 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43bP86448 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.31■□□□□ 0.04
Trim43bP86448 Gm11780-201ENSMUST00000136880 516 ntBASIC15.31■□□□□ 0.04
Trim43bP86448 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Trim43bP86448 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.31■□□□□ 0.04
Trim43bP86448 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.31■□□□□ 0.04
Trim43bP86448 Mir5131-201ENSMUST00000175426 93 ntBASIC15.31■□□□□ 0.04
Trim43bP86448 Mir5126-201ENSMUST00000175513 77 ntBASIC15.31■□□□□ 0.04
Trim43bP86448 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43bP86448 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.31■□□□□ 0.04
Trim43bP86448 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.31■□□□□ 0.04
Trim43bP86448 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.31■□□□□ 0.04
Trim43bP86448 AV026068-213ENSMUST00000223675 1171 ntBASIC15.31■□□□□ 0.04
Trim43bP86448 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43bP86448 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trim43bP86448 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43bP86448 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trim43bP86448 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43bP86448 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43bP86448 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43bP86448 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43bP86448 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43bP86448 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim43bP86448 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43bP86448 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43bP86448 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43bP86448 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trim43bP86448 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.3■□□□□ 0.04
Trim43bP86448 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43bP86448 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.3■□□□□ 0.04
Trim43bP86448 Gm12350-201ENSMUST00000121208 462 ntBASIC15.3■□□□□ 0.04
Trim43bP86448 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43bP86448 Gm23547-201ENSMUST00000158210 271 ntBASIC15.3■□□□□ 0.04
Trim43bP86448 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.3■□□□□ 0.04
Trim43bP86448 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43bP86448 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim43bP86448 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.3■□□□□ 0.04
Trim43bP86448 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43bP86448 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43bP86448 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.3■□□□□ 0.04
Trim43bP86448 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim43bP86448 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms