Protein–RNA interactions for Protein: P70339

Frat1, Proto-oncogene FRAT1, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frat1P70339 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Frat1P70339 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Frat1P70339 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.18■□□□□ 0.18
Frat1P70339 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Frat1P70339 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Frat1P70339 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Frat1P70339 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Frat1P70339 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Frat1P70339 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Frat1P70339 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Frat1P70339 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.18■□□□□ 0.18
Frat1P70339 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Frat1P70339 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Frat1P70339 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Frat1P70339 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Frat1P70339 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Frat1P70339 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Frat1P70339 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Frat1P70339 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Frat1P70339 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.18■□□□□ 0.18
Frat1P70339 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Frat1P70339 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Frat1P70339 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Frat1P70339 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Frat1P70339 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Frat1P70339 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Frat1P70339 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Frat1P70339 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Frat1P70339 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Frat1P70339 Gm13559-201ENSMUST00000120476 863 ntBASIC16.17■□□□□ 0.18
Frat1P70339 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Frat1P70339 Gm19164-201ENSMUST00000210667 640 ntBASIC16.17■□□□□ 0.18
Frat1P70339 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Frat1P70339 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Frat1P70339 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Frat1P70339 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Frat1P70339 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Frat1P70339 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Frat1P70339 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Frat1P70339 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Frat1P70339 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Frat1P70339 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Frat1P70339 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Frat1P70339 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.16■□□□□ 0.18
Frat1P70339 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Frat1P70339 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Frat1P70339 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Frat1P70339 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Frat1P70339 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Frat1P70339 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Frat1P70339 Mir770-201ENSMUST00000103252 94 ntBASIC16.16■□□□□ 0.18
Frat1P70339 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Frat1P70339 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.16■□□□□ 0.18
Frat1P70339 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.16■□□□□ 0.18
Frat1P70339 Gm45058-201ENSMUST00000205810 766 ntBASIC16.16■□□□□ 0.18
Frat1P70339 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.16■□□□□ 0.18
Frat1P70339 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Frat1P70339 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Frat1P70339 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Frat1P70339 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Frat1P70339 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Frat1P70339 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Frat1P70339 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Frat1P70339 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Frat1P70339 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Frat1P70339 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Frat1P70339 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Frat1P70339 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.16■□□□□ 0.18
Frat1P70339 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Frat1P70339 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Frat1P70339 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Frat1P70339 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.15■□□□□ 0.18
Frat1P70339 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Frat1P70339 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC16.15■□□□□ 0.18
Frat1P70339 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Frat1P70339 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Frat1P70339 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Frat1P70339 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Frat1P70339 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Frat1P70339 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Frat1P70339 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Frat1P70339 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Frat1P70339 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.15■□□□□ 0.18
Frat1P70339 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Frat1P70339 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.15■□□□□ 0.18
Frat1P70339 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Frat1P70339 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Frat1P70339 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.15■□□□□ 0.18
Frat1P70339 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Frat1P70339 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Frat1P70339 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Frat1P70339 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Frat1P70339 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Frat1P70339 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Frat1P70339 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Frat1P70339 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Frat1P70339 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Frat1P70339 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Frat1P70339 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Frat1P70339 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms