Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Rpl39P62892 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.63□□□□□ -0.71
Rpl39P62892 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Rpl39P62892 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rpl39P62892 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rpl39P62892 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rpl39P62892 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rpl39P62892 Gm8668-201ENSMUST00000120559 1447 ntBASIC10.63□□□□□ -0.71
Rpl39P62892 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rpl39P62892 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rpl39P62892 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rpl39P62892 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rpl39P62892 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rpl39P62892 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rpl39P62892 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Rpl39P62892 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.63□□□□□ -0.71
Rpl39P62892 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rpl39P62892 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rpl39P62892 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Rpl39P62892 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC10.63□□□□□ -0.71
Rpl39P62892 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Rpl39P62892 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Rpl39P62892 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Rpl39P62892 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Rpl39P62892 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Rpl39P62892 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Rpl39P62892 Acot6-202ENSMUST00000222921 3622 ntBASIC10.62□□□□□ -0.71
Rpl39P62892 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC10.62□□□□□ -0.71
Rpl39P62892 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC10.62□□□□□ -0.71
Rpl39P62892 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Celf4-206ENSMUST00000224553 1729 ntBASIC10.62□□□□□ -0.71
Rpl39P62892 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Rpl39P62892 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC10.62□□□□□ -0.71
Rpl39P62892 Gm12008-201ENSMUST00000117791 755 ntBASIC10.62□□□□□ -0.71
Rpl39P62892 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC10.62□□□□□ -0.71
Rpl39P62892 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC10.62□□□□□ -0.71
Rpl39P62892 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC10.62□□□□□ -0.71
Rpl39P62892 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC10.62□□□□□ -0.71
Rpl39P62892 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC10.62□□□□□ -0.71
Rpl39P62892 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC10.62□□□□□ -0.71
Rpl39P62892 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Rpl39P62892 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Rpl39P62892 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC10.62□□□□□ -0.71
Rpl39P62892 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Rpl39P62892 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Rpl39P62892 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC10.61□□□□□ -0.71
Rpl39P62892 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rpl39P62892 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rpl39P62892 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rpl39P62892 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC10.61□□□□□ -0.71
Rpl39P62892 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rpl39P62892 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rpl39P62892 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rpl39P62892 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rpl39P62892 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Rpl39P62892 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rpl39P62892 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rpl39P62892 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Rpl39P62892 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rpl39P62892 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Rpl39P62892 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC10.61□□□□□ -0.71
Rpl39P62892 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC10.61□□□□□ -0.71
Rpl39P62892 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC10.61□□□□□ -0.71
Rpl39P62892 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC10.61□□□□□ -0.71
Rpl39P62892 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rpl39P62892 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rpl39P62892 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rpl39P62892 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rpl39P62892 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rpl39P62892 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Rpl39P62892 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Rpl39P62892 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms