Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm6P62313 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm6P62313 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm6P62313 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Lsm6P62313 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Lsm6P62313 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm6P62313 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.05□□□□□ -0.32
Lsm6P62313 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm6P62313 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm6P62313 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm6P62313 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Lsm6P62313 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm6P62313 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm6P62313 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm6P62313 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm6P62313 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm6P62313 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Lsm6P62313 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm6P62313 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm6P62313 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.05□□□□□ -0.32
Lsm6P62313 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.05□□□□□ -0.32
Lsm6P62313 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm6P62313 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm6P62313 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm6P62313 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm6P62313 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm6P62313 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm6P62313 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm6P62313 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm6P62313 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Lsm6P62313 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Lsm6P62313 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.05□□□□□ -0.32
Lsm6P62313 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Lsm6P62313 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Lsm6P62313 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm6P62313 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm6P62313 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm6P62313 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lsm6P62313 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm6P62313 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm6P62313 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm6P62313 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Lsm6P62313 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.04□□□□□ -0.32
Lsm6P62313 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm6P62313 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm6P62313 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.04□□□□□ -0.32
Lsm6P62313 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.04□□□□□ -0.32
Lsm6P62313 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.04□□□□□ -0.32
Lsm6P62313 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm6P62313 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Lsm6P62313 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.04□□□□□ -0.32
Lsm6P62313 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.04□□□□□ -0.32
Lsm6P62313 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.04□□□□□ -0.32
Lsm6P62313 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.04□□□□□ -0.32
Lsm6P62313 Mzt1-203ENSMUST00000227948 952 ntBASIC13.04□□□□□ -0.32
Lsm6P62313 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lsm6P62313 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lsm6P62313 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.04□□□□□ -0.32
Lsm6P62313 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Lsm6P62313 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lsm6P62313 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lsm6P62313 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm6P62313 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm6P62313 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm6P62313 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm6P62313 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.04□□□□□ -0.32
Lsm6P62313 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm6P62313 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm6P62313 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.04□□□□□ -0.32
Lsm6P62313 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm6P62313 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Lsm6P62313 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm6P62313 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Lsm6P62313 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm6P62313 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.03□□□□□ -0.32
Lsm6P62313 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm6P62313 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm6P62313 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Lsm6P62313 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm6P62313 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm6P62313 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm6P62313 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Lsm6P62313 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm6P62313 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
Lsm6P62313 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Lsm6P62313 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm6P62313 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm6P62313 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.03□□□□□ -0.32
Lsm6P62313 Gm27741-201ENSMUST00000185060 237 ntBASIC13.03□□□□□ -0.32
Lsm6P62313 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm6P62313 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm6P62313 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.03□□□□□ -0.32
Lsm6P62313 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.03□□□□□ -0.32
Lsm6P62313 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.03□□□□□ -0.32
Lsm6P62313 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm6P62313 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm6P62313 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm6P62313 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.03□□□□□ -0.32
Lsm6P62313 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm6P62313 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms