Protein–RNA interactions for Protein: P59326

Ythdf1, YTH domain-containing family protein 1, mousemouse

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ythdf1P59326 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.33□□□□□ -0.11
Ythdf1P59326 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.11
Ythdf1P59326 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ythdf1P59326 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ythdf1P59326 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ythdf1P59326 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ythdf1P59326 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ythdf1P59326 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.33□□□□□ -0.12
Ythdf1P59326 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ythdf1P59326 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ythdf1P59326 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.33□□□□□ -0.12
Ythdf1P59326 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ythdf1P59326 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.33□□□□□ -0.12
Ythdf1P59326 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.33□□□□□ -0.12
Ythdf1P59326 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.33□□□□□ -0.12
Ythdf1P59326 Gm18101-201ENSMUST00000215769 548 ntBASIC14.33□□□□□ -0.12
Ythdf1P59326 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ythdf1P59326 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ythdf1P59326 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ythdf1P59326 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ythdf1P59326 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ythdf1P59326 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ythdf1P59326 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ythdf1P59326 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ythdf1P59326 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ythdf1P59326 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.33□□□□□ -0.12
Ythdf1P59326 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Ythdf1P59326 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ythdf1P59326 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.33□□□□□ -0.12
Ythdf1P59326 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.32□□□□□ -0.12
Ythdf1P59326 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ythdf1P59326 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ythdf1P59326 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ythdf1P59326 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.32□□□□□ -0.12
Ythdf1P59326 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ythdf1P59326 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.32□□□□□ -0.12
Ythdf1P59326 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ythdf1P59326 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ythdf1P59326 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ythdf1P59326 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Ythdf1P59326 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ythdf1P59326 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ythdf1P59326 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.32□□□□□ -0.12
Ythdf1P59326 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ythdf1P59326 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.32□□□□□ -0.12
Ythdf1P59326 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.32□□□□□ -0.12
Ythdf1P59326 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.32□□□□□ -0.12
Ythdf1P59326 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.32□□□□□ -0.12
Ythdf1P59326 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ythdf1P59326 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ythdf1P59326 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ythdf1P59326 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ythdf1P59326 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ythdf1P59326 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ythdf1P59326 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.32□□□□□ -0.12
Ythdf1P59326 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ythdf1P59326 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Ythdf1P59326 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ythdf1P59326 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ythdf1P59326 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ythdf1P59326 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ythdf1P59326 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.32□□□□□ -0.12
Ythdf1P59326 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ythdf1P59326 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ythdf1P59326 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ythdf1P59326 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ythdf1P59326 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ythdf1P59326 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ythdf1P59326 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ythdf1P59326 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ythdf1P59326 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.31□□□□□ -0.12
Ythdf1P59326 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ythdf1P59326 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.31□□□□□ -0.12
Ythdf1P59326 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.31□□□□□ -0.12
Ythdf1P59326 Mir5122-201ENSMUST00000175004 89 ntBASIC14.31□□□□□ -0.12
Ythdf1P59326 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.31□□□□□ -0.12
Ythdf1P59326 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ythdf1P59326 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Ythdf1P59326 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.31□□□□□ -0.12
Ythdf1P59326 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ythdf1P59326 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ythdf1P59326 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.31□□□□□ -0.12
Ythdf1P59326 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ythdf1P59326 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ythdf1P59326 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.31□□□□□ -0.12
Ythdf1P59326 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Ythdf1P59326 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ythdf1P59326 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ythdf1P59326 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ythdf1P59326 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ythdf1P59326 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ythdf1P59326 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ythdf1P59326 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ythdf1P59326 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ythdf1P59326 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ythdf1P59326 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ythdf1P59326 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ythdf1P59326 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ythdf1P59326 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Ythdf1P59326 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms