Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm5320-201ENSMUST00000207163 1519 ntBASIC18.75■□□□□ 0.59
Msh6P54276 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Msh6P54276 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh6P54276 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh6P54276 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh6P54276 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
Msh6P54276 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh6P54276 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh6P54276 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Msh6P54276 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Msh6P54276 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.74■□□□□ 0.59
Msh6P54276 Gm6912-201ENSMUST00000117218 544 ntBASIC18.74■□□□□ 0.59
Msh6P54276 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Msh6P54276 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh6P54276 Gm43703-201ENSMUST00000200523 763 ntBASIC18.74■□□□□ 0.59
Msh6P54276 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Msh6P54276 AC090659.2-201ENSMUST00000225378 1186 ntBASIC18.74■□□□□ 0.59
Msh6P54276 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Msh6P54276 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh6P54276 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh6P54276 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh6P54276 Gm15163-201ENSMUST00000120749 1302 ntBASIC18.74■□□□□ 0.59
Msh6P54276 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh6P54276 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh6P54276 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh6P54276 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Msh6P54276 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh6P54276 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Msh6P54276 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Msh6P54276 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Msh6P54276 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.73■□□□□ 0.59
Msh6P54276 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.73■□□□□ 0.59
Msh6P54276 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Gm43433-201ENSMUST00000196573 481 ntBASIC18.73■□□□□ 0.59
Msh6P54276 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Msh6P54276 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Msh6P54276 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Msh6P54276 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Msh6P54276 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh6P54276 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Msh6P54276 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Msh6P54276 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Msh6P54276 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Msh6P54276 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh6P54276 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh6P54276 Gm4204-201ENSMUST00000110798 1231 ntBASIC18.72■□□□□ 0.59
Msh6P54276 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Msh6P54276 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Msh6P54276 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC18.72■□□□□ 0.59
Msh6P54276 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh6P54276 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh6P54276 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Msh6P54276 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Msh6P54276 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Msh6P54276 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh6P54276 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh6P54276 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh6P54276 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
Msh6P54276 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh6P54276 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh6P54276 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh6P54276 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh6P54276 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.71■□□□□ 0.59
Msh6P54276 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC18.71■□□□□ 0.59
Msh6P54276 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Msh6P54276 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Msh6P54276 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.71■□□□□ 0.59
Msh6P54276 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC18.71■□□□□ 0.59
Msh6P54276 Cdk7-205ENSMUST00000225990 1159 ntBASIC18.71■□□□□ 0.59
Msh6P54276 Gm6180-201ENSMUST00000065243 498 ntBASIC18.71■□□□□ 0.59
Msh6P54276 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Msh6P54276 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.71■□□□□ 0.59
Msh6P54276 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh6P54276 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Msh6P54276 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh6P54276 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh6P54276 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Msh6P54276 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms