Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.78□□□□□ -0.04
Atxn1P54254 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Atxn1P54254 Syt7-204ENSMUST00000223586 1344 ntBASIC14.78□□□□□ -0.04
Atxn1P54254 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Atxn1P54254 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.78□□□□□ -0.04
Atxn1P54254 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.78□□□□□ -0.04
Atxn1P54254 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.78□□□□□ -0.04
Atxn1P54254 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.78□□□□□ -0.04
Atxn1P54254 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.78□□□□□ -0.04
Atxn1P54254 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
Atxn1P54254 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Atxn1P54254 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Atxn1P54254 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Atxn1P54254 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Atxn1P54254 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Atxn1P54254 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Atxn1P54254 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Atxn1P54254 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Atxn1P54254 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Atxn1P54254 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Atxn1P54254 Gm6973-201ENSMUST00000117080 721 ntBASIC14.77□□□□□ -0.05
Atxn1P54254 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Atxn1P54254 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.77□□□□□ -0.05
Atxn1P54254 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Atxn1P54254 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.77□□□□□ -0.05
Atxn1P54254 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.77□□□□□ -0.05
Atxn1P54254 Gm9824-201ENSMUST00000178707 561 ntBASIC14.77□□□□□ -0.05
Atxn1P54254 Mir7085-201ENSMUST00000184353 66 ntBASIC14.77□□□□□ -0.05
Atxn1P54254 Mir6420-201ENSMUST00000185032 102 ntBASIC14.77□□□□□ -0.05
Atxn1P54254 Gm38319-201ENSMUST00000194537 1266 ntBASIC14.77□□□□□ -0.05
Atxn1P54254 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.77□□□□□ -0.05
Atxn1P54254 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.77□□□□□ -0.05
Atxn1P54254 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Atxn1P54254 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.77□□□□□ -0.05
Atxn1P54254 Gm10154-201ENSMUST00000084445 354 ntBASIC14.77□□□□□ -0.05
Atxn1P54254 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Atxn1P54254 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Atxn1P54254 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Atxn1P54254 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.77□□□□□ -0.05
Atxn1P54254 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Atxn1P54254 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Atxn1P54254 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Atxn1P54254 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.77□□□□□ -0.05
Atxn1P54254 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Atxn1P54254 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Atxn1P54254 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Atxn1P54254 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Atxn1P54254 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atxn1P54254 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atxn1P54254 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atxn1P54254 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atxn1P54254 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atxn1P54254 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Atxn1P54254 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Atxn1P54254 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atxn1P54254 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atxn1P54254 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atxn1P54254 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Atxn1P54254 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Atxn1P54254 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atxn1P54254 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Atxn1P54254 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Atxn1P54254 Gm6007-201ENSMUST00000208170 823 ntBASIC14.76□□□□□ -0.05
Atxn1P54254 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.76□□□□□ -0.05
Atxn1P54254 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.76□□□□□ -0.05
Atxn1P54254 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.76□□□□□ -0.05
Atxn1P54254 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atxn1P54254 Gm9899-201ENSMUST00000065519 555 ntBASIC14.76□□□□□ -0.05
Atxn1P54254 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Atxn1P54254 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atxn1P54254 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atxn1P54254 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atxn1P54254 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Atxn1P54254 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms