Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.89□□□□□ -0.03
Fdft1P53798 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fdft1P53798 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.89□□□□□ -0.03
Fdft1P53798 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fdft1P53798 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Fdft1P53798 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fdft1P53798 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fdft1P53798 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fdft1P53798 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fdft1P53798 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Fdft1P53798 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fdft1P53798 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Fdft1P53798 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.88□□□□□ -0.03
Fdft1P53798 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Fdft1P53798 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Fdft1P53798 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Fdft1P53798 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fdft1P53798 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Fdft1P53798 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Fdft1P53798 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Fdft1P53798 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fdft1P53798 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fdft1P53798 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Fdft1P53798 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Fdft1P53798 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Fdft1P53798 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Fdft1P53798 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fdft1P53798 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.88□□□□□ -0.03
Fdft1P53798 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fdft1P53798 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fdft1P53798 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Fdft1P53798 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.88□□□□□ -0.03
Fdft1P53798 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fdft1P53798 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.88□□□□□ -0.03
Fdft1P53798 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Fdft1P53798 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Fdft1P53798 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Fdft1P53798 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Fdft1P53798 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.87□□□□□ -0.03
Fdft1P53798 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Fdft1P53798 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Fdft1P53798 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Fdft1P53798 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Fdft1P53798 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Fdft1P53798 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Fdft1P53798 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Fdft1P53798 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Fdft1P53798 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fdft1P53798 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fdft1P53798 Celf4-206ENSMUST00000224553 1729 ntBASIC14.86□□□□□ -0.03
Fdft1P53798 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Fdft1P53798 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Fdft1P53798 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fdft1P53798 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fdft1P53798 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Fdft1P53798 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fdft1P53798 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.86□□□□□ -0.03
Fdft1P53798 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.86□□□□□ -0.03
Fdft1P53798 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.86□□□□□ -0.03
Fdft1P53798 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.86□□□□□ -0.03
Fdft1P53798 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.86□□□□□ -0.03
Fdft1P53798 Gm7787-201ENSMUST00000216858 688 ntBASIC14.86□□□□□ -0.03
Fdft1P53798 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Fdft1P53798 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.86□□□□□ -0.03
Fdft1P53798 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.86□□□□□ -0.03
Fdft1P53798 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms