Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pdx1P52946 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.72□□□□□ -0.05
Pdx1P52946 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdx1P52946 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Pdx1P52946 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdx1P52946 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pdx1P52946 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdx1P52946 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pdx1P52946 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pdx1P52946 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdx1P52946 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.72□□□□□ -0.05
Pdx1P52946 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.72□□□□□ -0.05
Pdx1P52946 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.72□□□□□ -0.05
Pdx1P52946 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdx1P52946 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.72□□□□□ -0.05
Pdx1P52946 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.72□□□□□ -0.05
Pdx1P52946 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdx1P52946 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdx1P52946 Gm10175-201ENSMUST00000086013 645 ntBASIC14.72□□□□□ -0.05
Pdx1P52946 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pdx1P52946 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdx1P52946 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.72□□□□□ -0.05
Pdx1P52946 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdx1P52946 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdx1P52946 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdx1P52946 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdx1P52946 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pdx1P52946 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pdx1P52946 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pdx1P52946 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.72□□□□□ -0.05
Pdx1P52946 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdx1P52946 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdx1P52946 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdx1P52946 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdx1P52946 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdx1P52946 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pdx1P52946 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pdx1P52946 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdx1P52946 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Pdx1P52946 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdx1P52946 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pdx1P52946 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdx1P52946 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdx1P52946 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pdx1P52946 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pdx1P52946 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pdx1P52946 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.71□□□□□ -0.05
Pdx1P52946 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pdx1P52946 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.71□□□□□ -0.05
Pdx1P52946 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.71□□□□□ -0.05
Pdx1P52946 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdx1P52946 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdx1P52946 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdx1P52946 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pdx1P52946 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdx1P52946 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdx1P52946 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdx1P52946 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdx1P52946 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdx1P52946 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pdx1P52946 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Pdx1P52946 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.06
Pdx1P52946 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pdx1P52946 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Pdx1P52946 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pdx1P52946 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.7□□□□□ -0.06
Pdx1P52946 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pdx1P52946 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.7□□□□□ -0.06
Pdx1P52946 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pdx1P52946 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.7□□□□□ -0.06
Pdx1P52946 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pdx1P52946 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdx1P52946 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdx1P52946 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Pdx1P52946 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pdx1P52946 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pdx1P52946 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Pdx1P52946 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms