Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.27□□□□□ -0.13
Sox18P43680 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Sox18P43680 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox18P43680 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox18P43680 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox18P43680 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sox18P43680 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox18P43680 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox18P43680 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox18P43680 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox18P43680 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.27□□□□□ -0.13
Sox18P43680 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.27□□□□□ -0.13
Sox18P43680 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox18P43680 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sox18P43680 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Sox18P43680 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox18P43680 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox18P43680 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox18P43680 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox18P43680 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox18P43680 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.26□□□□□ -0.13
Sox18P43680 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.26□□□□□ -0.13
Sox18P43680 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Sox18P43680 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox18P43680 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox18P43680 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox18P43680 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox18P43680 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.26□□□□□ -0.13
Sox18P43680 Gm14363-201ENSMUST00000122304 409 ntBASIC14.26□□□□□ -0.13
Sox18P43680 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.26□□□□□ -0.13
Sox18P43680 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox18P43680 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Sox18P43680 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.26□□□□□ -0.13
Sox18P43680 Gm9908-201ENSMUST00000211534 448 ntBASIC14.26□□□□□ -0.13
Sox18P43680 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.26□□□□□ -0.13
Sox18P43680 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox18P43680 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox18P43680 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sox18P43680 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox18P43680 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Sox18P43680 Asic1-205ENSMUST00000228185 1818 ntBASIC14.26□□□□□ -0.13
Sox18P43680 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox18P43680 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox18P43680 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Sox18P43680 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox18P43680 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox18P43680 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox18P43680 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sox18P43680 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sox18P43680 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox18P43680 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox18P43680 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox18P43680 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox18P43680 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox18P43680 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox18P43680 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sox18P43680 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox18P43680 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox18P43680 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox18P43680 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.25□□□□□ -0.13
Sox18P43680 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Sox18P43680 Gm12091-201ENSMUST00000146791 830 ntBASIC14.25□□□□□ -0.13
Sox18P43680 Gm29667-201ENSMUST00000190817 490 ntBASIC14.25□□□□□ -0.13
Sox18P43680 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.25□□□□□ -0.13
Sox18P43680 Gm6266-201ENSMUST00000203844 806 ntBASIC14.25□□□□□ -0.13
Sox18P43680 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox18P43680 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox18P43680 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox18P43680 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox18P43680 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox18P43680 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox18P43680 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox18P43680 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox18P43680 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox18P43680 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Sox18P43680 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox18P43680 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Sox18P43680 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Sox18P43680 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox18P43680 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Sox18P43680 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox18P43680 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox18P43680 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox18P43680 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox18P43680 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox18P43680 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox18P43680 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox18P43680 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox18P43680 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.24□□□□□ -0.13
Sox18P43680 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox18P43680 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox18P43680 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox18P43680 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox18P43680 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.24□□□□□ -0.13
Sox18P43680 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox18P43680 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox18P43680 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Sox18P43680 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox18P43680 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Sox18P43680 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms