Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Gm23547-201ENSMUST00000158210 271 ntBASIC12.52□□□□□ -0.41
Mmp9P41245 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp9P41245 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp9P41245 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Mmp9P41245 Gm43514-201ENSMUST00000198852 424 ntBASIC12.52□□□□□ -0.41
Mmp9P41245 Gm17808-201ENSMUST00000200859 894 ntBASIC12.52□□□□□ -0.41
Mmp9P41245 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.52□□□□□ -0.41
Mmp9P41245 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp9P41245 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp9P41245 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp9P41245 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp9P41245 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp9P41245 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp9P41245 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp9P41245 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.52□□□□□ -0.41
Mmp9P41245 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp9P41245 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Mmp9P41245 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp9P41245 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp9P41245 Acot6-202ENSMUST00000222921 3622 ntBASIC12.52□□□□□ -0.41
Mmp9P41245 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp9P41245 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp9P41245 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp9P41245 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mmp9P41245 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.51□□□□□ -0.41
Mmp9P41245 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Mmp9P41245 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Mmp9P41245 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Mmp9P41245 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.51□□□□□ -0.41
Mmp9P41245 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Mmp9P41245 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC12.51□□□□□ -0.41
Mmp9P41245 Gm6443-201ENSMUST00000203599 874 ntBASIC12.51□□□□□ -0.41
Mmp9P41245 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Mmp9P41245 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.51□□□□□ -0.41
Mmp9P41245 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.51□□□□□ -0.41
Mmp9P41245 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.51□□□□□ -0.41
Mmp9P41245 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mmp9P41245 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp9P41245 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp9P41245 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp9P41245 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.5□□□□□ -0.41
Mmp9P41245 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp9P41245 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp9P41245 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp9P41245 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp9P41245 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Mmp9P41245 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp9P41245 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp9P41245 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp9P41245 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC12.5□□□□□ -0.41
Mmp9P41245 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp9P41245 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.5□□□□□ -0.41
Mmp9P41245 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.5□□□□□ -0.41
Mmp9P41245 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.5□□□□□ -0.41
Mmp9P41245 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp9P41245 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp9P41245 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp9P41245 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Mmp9P41245 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.5□□□□□ -0.41
Mmp9P41245 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp9P41245 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp9P41245 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
Mmp9P41245 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp9P41245 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp9P41245 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp9P41245 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp9P41245 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp9P41245 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Mmp9P41245 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Mmp9P41245 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mmp9P41245 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Mmp9P41245 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Mmp9P41245 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp9P41245 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp9P41245 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.49□□□□□ -0.41
Mmp9P41245 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Mmp9P41245 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms