Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Gm9682-201ENSMUST00000197505 556 ntBASIC14.43□□□□□ -0.1
TfamP40630 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.43□□□□□ -0.1
TfamP40630 Gm6376-201ENSMUST00000209407 580 ntBASIC14.43□□□□□ -0.1
TfamP40630 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TfamP40630 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.43□□□□□ -0.1
TfamP40630 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TfamP40630 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TfamP40630 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TfamP40630 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TfamP40630 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
TfamP40630 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TfamP40630 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TfamP40630 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TfamP40630 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
TfamP40630 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TfamP40630 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TfamP40630 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TfamP40630 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TfamP40630 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
TfamP40630 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.42□□□□□ -0.1
TfamP40630 Gm24589-201ENSMUST00000116692 94 ntBASIC14.42□□□□□ -0.1
TfamP40630 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.42□□□□□ -0.1
TfamP40630 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TfamP40630 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TfamP40630 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TfamP40630 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TfamP40630 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TfamP40630 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TfamP40630 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TfamP40630 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TfamP40630 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TfamP40630 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.41□□□□□ -0.1
TfamP40630 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TfamP40630 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.41□□□□□ -0.1
TfamP40630 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TfamP40630 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TfamP40630 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TfamP40630 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TfamP40630 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TfamP40630 Gm7222-201ENSMUST00000117512 906 ntBASIC14.41□□□□□ -0.1
TfamP40630 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TfamP40630 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.41□□□□□ -0.1
TfamP40630 Gm43767-201ENSMUST00000198933 381 ntBASIC14.41□□□□□ -0.1
TfamP40630 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TfamP40630 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.41□□□□□ -0.1
TfamP40630 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TfamP40630 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TfamP40630 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TfamP40630 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.41□□□□□ -0.1
TfamP40630 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TfamP40630 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TfamP40630 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TfamP40630 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TfamP40630 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TfamP40630 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TfamP40630 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TfamP40630 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TfamP40630 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TfamP40630 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
TfamP40630 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TfamP40630 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TfamP40630 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.4□□□□□ -0.1
TfamP40630 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.4□□□□□ -0.1
TfamP40630 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TfamP40630 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
TfamP40630 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.4□□□□□ -0.1
TfamP40630 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.4□□□□□ -0.1
TfamP40630 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
TfamP40630 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TfamP40630 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TfamP40630 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TfamP40630 Rps4l-201ENSMUST00000071745 943 ntBASIC14.4□□□□□ -0.1
TfamP40630 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
TfamP40630 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.4□□□□□ -0.1
TfamP40630 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TfamP40630 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TfamP40630 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TfamP40630 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms