Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Gm19164-201ENSMUST00000210667 640 ntBASIC15.01□□□□□ -0.01
Fen1P39749 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fen1P39749 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fen1P39749 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fen1P39749 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Fen1P39749 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fen1P39749 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fen1P39749 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fen1P39749 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Fen1P39749 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Fen1P39749 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fen1P39749 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fen1P39749 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Fen1P39749 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Gm8242-201ENSMUST00000193029 1420 ntBASIC15□□□□□ -0.01
Fen1P39749 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Fen1P39749 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Fen1P39749 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC15□□□□□ -0.01
Fen1P39749 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Fen1P39749 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15□□□□□ -0.01
Fen1P39749 Gm14722-201ENSMUST00000118943 689 ntBASIC15□□□□□ -0.01
Fen1P39749 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Gm7286-201ENSMUST00000182691 1007 ntBASIC15□□□□□ -0.01
Fen1P39749 Gm9172-201ENSMUST00000212092 954 ntBASIC15□□□□□ -0.01
Fen1P39749 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Vti1a-206ENSMUST00000225529 1244 ntBASIC15□□□□□ -0.01
Fen1P39749 AC159093.1-201ENSMUST00000227779 380 ntBASIC15□□□□□ -0.01
Fen1P39749 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15□□□□□ -0.01
Fen1P39749 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Fen1P39749 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Fen1P39749 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Fen1P39749 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Fen1P39749 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC15□□□□□ -0.01
Fen1P39749 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Fen1P39749 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Fen1P39749 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Fen1P39749 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.99□□□□□ -0.01
Fen1P39749 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.99□□□□□ -0.01
Fen1P39749 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.99□□□□□ -0.01
Fen1P39749 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Gm17807-201ENSMUST00000186869 298 ntBASIC14.99□□□□□ -0.01
Fen1P39749 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.99□□□□□ -0.01
Fen1P39749 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Fen1P39749 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Fen1P39749 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Fen1P39749 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Fen1P39749 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Fen1P39749 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.98□□□□□ -0.01
Fen1P39749 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fen1P39749 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fen1P39749 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Fen1P39749 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Fen1P39749 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Fen1P39749 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms