Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh4P39038 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.25□□□□□ -0.13
Cdh4P39038 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Cdh4P39038 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.25□□□□□ -0.13
Cdh4P39038 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.25□□□□□ -0.13
Cdh4P39038 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.25□□□□□ -0.13
Cdh4P39038 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh4P39038 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh4P39038 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh4P39038 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh4P39038 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cdh4P39038 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.25□□□□□ -0.13
Cdh4P39038 Gm10154-201ENSMUST00000084445 354 ntBASIC14.25□□□□□ -0.13
Cdh4P39038 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh4P39038 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh4P39038 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh4P39038 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh4P39038 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Cdh4P39038 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh4P39038 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh4P39038 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Cdh4P39038 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh4P39038 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh4P39038 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdh4P39038 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdh4P39038 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Cdh4P39038 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh4P39038 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh4P39038 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cdh4P39038 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh4P39038 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh4P39038 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh4P39038 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh4P39038 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh4P39038 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh4P39038 Gm16198-201ENSMUST00000118766 670 ntBASIC14.24□□□□□ -0.13
Cdh4P39038 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdh4P39038 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.24□□□□□ -0.13
Cdh4P39038 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.24□□□□□ -0.13
Cdh4P39038 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.24□□□□□ -0.13
Cdh4P39038 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh4P39038 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh4P39038 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Cdh4P39038 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cdh4P39038 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cdh4P39038 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh4P39038 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh4P39038 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdh4P39038 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.24□□□□□ -0.13
Cdh4P39038 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh4P39038 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cdh4P39038 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh4P39038 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh4P39038 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh4P39038 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh4P39038 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh4P39038 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Cdh4P39038 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh4P39038 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cdh4P39038 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh4P39038 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdh4P39038 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.23□□□□□ -0.13
Cdh4P39038 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh4P39038 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh4P39038 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh4P39038 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.23□□□□□ -0.13
Cdh4P39038 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.23□□□□□ -0.13
Cdh4P39038 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.23□□□□□ -0.13
Cdh4P39038 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh4P39038 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh4P39038 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh4P39038 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cdh4P39038 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh4P39038 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh4P39038 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh4P39038 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh4P39038 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh4P39038 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh4P39038 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh4P39038 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh4P39038 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cdh4P39038 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh4P39038 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Cdh4P39038 Gm15427-201ENSMUST00000117288 531 ntBASIC14.22□□□□□ -0.13
Cdh4P39038 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.22□□□□□ -0.13
Cdh4P39038 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.22□□□□□ -0.13
Cdh4P39038 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.22□□□□□ -0.13
Cdh4P39038 Gm37935-201ENSMUST00000192012 982 ntBASIC14.22□□□□□ -0.13
Cdh4P39038 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.22□□□□□ -0.13
Cdh4P39038 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.22□□□□□ -0.13
Cdh4P39038 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh4P39038 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh4P39038 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh4P39038 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh4P39038 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh4P39038 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh4P39038 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh4P39038 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh4P39038 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh4P39038 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms