Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 Carlr-201ENSMUST00000181515 2574 ntBASIC13.05□□□□□ -0.32
Upk2P38575 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Upk2P38575 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.04□□□□□ -0.32
Upk2P38575 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Upk2P38575 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.04□□□□□ -0.32
Upk2P38575 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.04□□□□□ -0.32
Upk2P38575 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.04□□□□□ -0.32
Upk2P38575 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Upk2P38575 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.04□□□□□ -0.32
Upk2P38575 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Upk2P38575 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Upk2P38575 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.04□□□□□ -0.32
Upk2P38575 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk2P38575 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.03□□□□□ -0.32
Upk2P38575 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk2P38575 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk2P38575 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk2P38575 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Upk2P38575 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk2P38575 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk2P38575 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk2P38575 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk2P38575 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.03□□□□□ -0.32
Upk2P38575 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.03□□□□□ -0.32
Upk2P38575 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk2P38575 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk2P38575 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk2P38575 Gm14140-201ENSMUST00000119999 995 ntBASIC13.03□□□□□ -0.32
Upk2P38575 Gm12134-201ENSMUST00000122109 520 ntBASIC13.03□□□□□ -0.32
Upk2P38575 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Upk2P38575 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.03□□□□□ -0.32
Upk2P38575 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.03□□□□□ -0.32
Upk2P38575 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.03□□□□□ -0.32
Upk2P38575 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Upk2P38575 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk2P38575 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Upk2P38575 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk2P38575 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk2P38575 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Upk2P38575 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk2P38575 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Upk2P38575 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk2P38575 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.03□□□□□ -0.32
Upk2P38575 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Upk2P38575 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk2P38575 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.03□□□□□ -0.32
Upk2P38575 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Upk2P38575 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upk2P38575 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Upk2P38575 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Upk2P38575 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Upk2P38575 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms