Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thbs1P35441 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Thbs1P35441 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Thbs1P35441 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thbs1P35441 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thbs1P35441 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thbs1P35441 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.75□□□□□ -0.21
Thbs1P35441 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thbs1P35441 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thbs1P35441 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Thbs1P35441 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.75□□□□□ -0.21
Thbs1P35441 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.75□□□□□ -0.21
Thbs1P35441 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thbs1P35441 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.75□□□□□ -0.21
Thbs1P35441 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Thbs1P35441 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.75□□□□□ -0.21
Thbs1P35441 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.75□□□□□ -0.21
Thbs1P35441 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thbs1P35441 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thbs1P35441 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.75□□□□□ -0.21
Thbs1P35441 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thbs1P35441 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thbs1P35441 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thbs1P35441 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.75□□□□□ -0.21
Thbs1P35441 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Thbs1P35441 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thbs1P35441 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Thbs1P35441 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thbs1P35441 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Thbs1P35441 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.75□□□□□ -0.21
Thbs1P35441 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thbs1P35441 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thbs1P35441 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Thbs1P35441 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Thbs1P35441 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Thbs1P35441 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
Thbs1P35441 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Thbs1P35441 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.74□□□□□ -0.21
Thbs1P35441 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Thbs1P35441 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Thbs1P35441 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.74□□□□□ -0.21
Thbs1P35441 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.74□□□□□ -0.21
Thbs1P35441 Mir5131-201ENSMUST00000175426 93 ntBASIC13.74□□□□□ -0.21
Thbs1P35441 Mir5126-201ENSMUST00000175513 77 ntBASIC13.74□□□□□ -0.21
Thbs1P35441 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.74□□□□□ -0.21
Thbs1P35441 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.74□□□□□ -0.21
Thbs1P35441 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Thbs1P35441 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Carlr-201ENSMUST00000181515 2574 ntBASIC13.74□□□□□ -0.21
Thbs1P35441 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Thbs1P35441 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thbs1P35441 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thbs1P35441 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thbs1P35441 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thbs1P35441 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thbs1P35441 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Thbs1P35441 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thbs1P35441 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thbs1P35441 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Thbs1P35441 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.73□□□□□ -0.21
Thbs1P35441 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thbs1P35441 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thbs1P35441 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thbs1P35441 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thbs1P35441 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Thbs1P35441 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Thbs1P35441 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thbs1P35441 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Thbs1P35441 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.73□□□□□ -0.21
Thbs1P35441 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thbs1P35441 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC13.73□□□□□ -0.21
Thbs1P35441 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Thbs1P35441 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Thbs1P35441 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms