Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Rom1P32958 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.78□□□□□ -0.52
Rom1P32958 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Rom1P32958 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Rom1P32958 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.78□□□□□ -0.52
Rom1P32958 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.78□□□□□ -0.52
Rom1P32958 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Rprl3-201ENSMUST00000157400 290 ntBASIC11.78□□□□□ -0.52
Rom1P32958 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Gm43767-201ENSMUST00000198933 381 ntBASIC11.78□□□□□ -0.52
Rom1P32958 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.78□□□□□ -0.52
Rom1P32958 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.78□□□□□ -0.52
Rom1P32958 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Rom1P32958 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Rom1P32958 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Rom1P32958 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Rom1P32958 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Rom1P32958 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Rom1P32958 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Rom1P32958 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rom1P32958 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rom1P32958 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rom1P32958 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rom1P32958 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rom1P32958 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rom1P32958 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
Rom1P32958 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rom1P32958 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rom1P32958 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Rom1P32958 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.52
Rom1P32958 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rom1P32958 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Rom1P32958 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rom1P32958 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Rom1P32958 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.77□□□□□ -0.53
Rom1P32958 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rom1P32958 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rom1P32958 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rom1P32958 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Rom1P32958 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.77□□□□□ -0.53
Rom1P32958 Gm9013-201ENSMUST00000132939 882 ntBASIC11.77□□□□□ -0.53
Rom1P32958 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rom1P32958 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Rom1P32958 Gm6623-201ENSMUST00000173570 544 ntBASIC11.77□□□□□ -0.53
Rom1P32958 Gm7889-201ENSMUST00000185591 958 ntBASIC11.77□□□□□ -0.53
Rom1P32958 Gm37055-201ENSMUST00000191866 133 ntBASIC11.77□□□□□ -0.53
Rom1P32958 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Rom1P32958 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.77□□□□□ -0.53
Rom1P32958 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rom1P32958 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rom1P32958 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC11.77□□□□□ -0.53
Rom1P32958 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Rom1P32958 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rom1P32958 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Rom1P32958 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rom1P32958 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rom1P32958 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rom1P32958 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rom1P32958 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rom1P32958 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rom1P32958 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rom1P32958 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Rom1P32958 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rom1P32958 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.76□□□□□ -0.53
Rom1P32958 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rom1P32958 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rom1P32958 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rom1P32958 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rom1P32958 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rom1P32958 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rom1P32958 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rom1P32958 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rom1P32958 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.76□□□□□ -0.53
Rom1P32958 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC11.76□□□□□ -0.53
Rom1P32958 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Rom1P32958 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rom1P32958 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rom1P32958 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rom1P32958 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms