Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a11P31650 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a11P31650 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a11P31650 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a11P31650 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a11P31650 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Slc6a11P31650 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.15□□□□□ -0.14
Slc6a11P31650 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Slc6a11P31650 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a11P31650 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a11P31650 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.15□□□□□ -0.14
Slc6a11P31650 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.15□□□□□ -0.14
Slc6a11P31650 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a11P31650 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Slc6a11P31650 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.15□□□□□ -0.14
Slc6a11P31650 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a11P31650 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.15□□□□□ -0.14
Slc6a11P31650 AV026068-213ENSMUST00000223675 1171 ntBASIC14.15□□□□□ -0.14
Slc6a11P31650 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a11P31650 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a11P31650 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a11P31650 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Slc6a11P31650 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a11P31650 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.15□□□□□ -0.14
Slc6a11P31650 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a11P31650 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a11P31650 Celf4-206ENSMUST00000224553 1729 ntBASIC14.15□□□□□ -0.14
Slc6a11P31650 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a11P31650 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a11P31650 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a11P31650 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Slc6a11P31650 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a11P31650 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Slc6a11P31650 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.14□□□□□ -0.15
Slc6a11P31650 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a11P31650 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a11P31650 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a11P31650 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a11P31650 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Slc6a11P31650 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a11P31650 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a11P31650 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a11P31650 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.14□□□□□ -0.15
Slc6a11P31650 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a11P31650 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.14□□□□□ -0.15
Slc6a11P31650 Gm6089-201ENSMUST00000197666 938 ntBASIC14.14□□□□□ -0.15
Slc6a11P31650 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a11P31650 Gm7506-201ENSMUST00000207758 815 ntBASIC14.14□□□□□ -0.15
Slc6a11P31650 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.14□□□□□ -0.15
Slc6a11P31650 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.14□□□□□ -0.15
Slc6a11P31650 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.14□□□□□ -0.15
Slc6a11P31650 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a11P31650 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a11P31650 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Slc6a11P31650 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a11P31650 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.14□□□□□ -0.15
Slc6a11P31650 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a11P31650 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Slc6a11P31650 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a11P31650 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a11P31650 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.14□□□□□ -0.15
Slc6a11P31650 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a11P31650 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a11P31650 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a11P31650 Carlr-201ENSMUST00000181515 2574 ntBASIC14.14□□□□□ -0.15
Slc6a11P31650 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Slc6a11P31650 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a11P31650 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Slc6a11P31650 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.13□□□□□ -0.15
Slc6a11P31650 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.13□□□□□ -0.15
Slc6a11P31650 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Gm12497-201ENSMUST00000138778 237 ntBASIC14.13□□□□□ -0.15
Slc6a11P31650 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.13□□□□□ -0.15
Slc6a11P31650 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.13□□□□□ -0.15
Slc6a11P31650 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.13□□□□□ -0.15
Slc6a11P31650 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.13□□□□□ -0.15
Slc6a11P31650 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Slc6a11P31650 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms