Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcam1P29533 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcam1P29533 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Vcam1P29533 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC17.04■□□□□ 0.32
Vcam1P29533 Gm16215-201ENSMUST00000161990 637 ntBASIC17.04■□□□□ 0.32
Vcam1P29533 H2-Pa-201ENSMUST00000182803 626 ntBASIC17.04■□□□□ 0.32
Vcam1P29533 Gm27838-201ENSMUST00000184829 128 ntBASIC17.04■□□□□ 0.32
Vcam1P29533 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Vcam1P29533 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.04■□□□□ 0.32
Vcam1P29533 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vcam1P29533 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcam1P29533 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Vcam1P29533 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcam1P29533 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Vcam1P29533 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vcam1P29533 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcam1P29533 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcam1P29533 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Vcam1P29533 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcam1P29533 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Vcam1P29533 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.03■□□□□ 0.32
Vcam1P29533 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vcam1P29533 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Vcam1P29533 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Vcam1P29533 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vcam1P29533 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vcam1P29533 Asic1-205ENSMUST00000228185 1818 ntBASIC17.03■□□□□ 0.32
Vcam1P29533 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vcam1P29533 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Vcam1P29533 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.03■□□□□ 0.32
Vcam1P29533 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vcam1P29533 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vcam1P29533 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vcam1P29533 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.03■□□□□ 0.32
Vcam1P29533 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vcam1P29533 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vcam1P29533 Gm15321-201ENSMUST00000121290 288 ntBASIC17.03■□□□□ 0.32
Vcam1P29533 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Vcam1P29533 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.03■□□□□ 0.32
Vcam1P29533 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vcam1P29533 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Vcam1P29533 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Vcam1P29533 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.03■□□□□ 0.32
Vcam1P29533 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vcam1P29533 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vcam1P29533 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.03■□□□□ 0.32
Vcam1P29533 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC17.03■□□□□ 0.32
Vcam1P29533 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.03■□□□□ 0.32
Vcam1P29533 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vcam1P29533 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vcam1P29533 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vcam1P29533 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vcam1P29533 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.03■□□□□ 0.32
Vcam1P29533 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Vcam1P29533 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vcam1P29533 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vcam1P29533 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Vcam1P29533 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vcam1P29533 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vcam1P29533 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vcam1P29533 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vcam1P29533 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vcam1P29533 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vcam1P29533 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vcam1P29533 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.02■□□□□ 0.32
Vcam1P29533 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.02■□□□□ 0.32
Vcam1P29533 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.02■□□□□ 0.32
Vcam1P29533 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.02■□□□□ 0.32
Vcam1P29533 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.02■□□□□ 0.32
Vcam1P29533 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.02■□□□□ 0.32
Vcam1P29533 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Vcam1P29533 Gm45453-201ENSMUST00000211758 853 ntBASIC17.02■□□□□ 0.32
Vcam1P29533 Gm9182-201ENSMUST00000217829 639 ntBASIC17.02■□□□□ 0.32
Vcam1P29533 Gm46209-201ENSMUST00000217912 553 ntBASIC17.02■□□□□ 0.32
Vcam1P29533 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Vcam1P29533 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vcam1P29533 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vcam1P29533 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vcam1P29533 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vcam1P29533 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vcam1P29533 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Vcam1P29533 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Vcam1P29533 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.01■□□□□ 0.31
Vcam1P29533 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vcam1P29533 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcam1P29533 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcam1P29533 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Vcam1P29533 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Vcam1P29533 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vcam1P29533 Gm7488-201ENSMUST00000117148 684 ntBASIC17.01■□□□□ 0.31
Vcam1P29533 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC17.01■□□□□ 0.31
Vcam1P29533 Gm44855-201ENSMUST00000205725 362 ntBASIC17.01■□□□□ 0.31
Vcam1P29533 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcam1P29533 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcam1P29533 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Vcam1P29533 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Vcam1P29533 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcam1P29533 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcam1P29533 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vcam1P29533 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms