Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.81□□□□□ -0.04
Nckap1P28660 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nckap1P28660 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nckap1P28660 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nckap1P28660 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nckap1P28660 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.81□□□□□ -0.04
Nckap1P28660 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Nckap1P28660 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Nckap1P28660 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.81□□□□□ -0.04
Nckap1P28660 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.81□□□□□ -0.04
Nckap1P28660 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.81□□□□□ -0.04
Nckap1P28660 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nckap1P28660 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nckap1P28660 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nckap1P28660 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nckap1P28660 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nckap1P28660 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Nckap1P28660 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nckap1P28660 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nckap1P28660 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nckap1P28660 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.81□□□□□ -0.04
Nckap1P28660 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nckap1P28660 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Nckap1P28660 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.8□□□□□ -0.04
Nckap1P28660 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.8□□□□□ -0.04
Nckap1P28660 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.8□□□□□ -0.04
Nckap1P28660 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.8□□□□□ -0.04
Nckap1P28660 Gm15483-201ENSMUST00000120338 456 ntBASIC14.8□□□□□ -0.04
Nckap1P28660 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Nckap1P28660 Gm43767-201ENSMUST00000198933 381 ntBASIC14.8□□□□□ -0.04
Nckap1P28660 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.8□□□□□ -0.04
Nckap1P28660 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.8□□□□□ -0.04
Nckap1P28660 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Nckap1P28660 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.8□□□□□ -0.04
Nckap1P28660 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nckap1P28660 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Nckap1P28660 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nckap1P28660 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nckap1P28660 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nckap1P28660 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nckap1P28660 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nckap1P28660 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nckap1P28660 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nckap1P28660 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nckap1P28660 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Nckap1P28660 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.79□□□□□ -0.04
Nckap1P28660 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Nckap1P28660 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.79□□□□□ -0.04
Nckap1P28660 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nckap1P28660 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nckap1P28660 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nckap1P28660 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.79□□□□□ -0.04
Nckap1P28660 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nckap1P28660 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nckap1P28660 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nckap1P28660 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nckap1P28660 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nckap1P28660 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Nckap1P28660 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nckap1P28660 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Nckap1P28660 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.79□□□□□ -0.04
Nckap1P28660 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nckap1P28660 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nckap1P28660 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nckap1P28660 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nckap1P28660 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nckap1P28660 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nckap1P28660 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Nckap1P28660 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Nckap1P28660 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nckap1P28660 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nckap1P28660 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.78□□□□□ -0.04
Nckap1P28660 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.78□□□□□ -0.04
Nckap1P28660 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Nckap1P28660 Gm27622-201ENSMUST00000183779 60 ntBASIC14.78□□□□□ -0.04
Nckap1P28660 Gm27920-201ENSMUST00000183953 96 ntBASIC14.78□□□□□ -0.04
Nckap1P28660 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms