Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Ccl6P27784 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
Ccl6P27784 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.61□□□□□ -0.55
Ccl6P27784 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Ccl6P27784 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Ccl6P27784 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.61□□□□□ -0.55
Ccl6P27784 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.61□□□□□ -0.55
Ccl6P27784 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Gm4899-201ENSMUST00000178708 719 ntBASIC11.61□□□□□ -0.55
Ccl6P27784 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 AV026068-213ENSMUST00000223675 1171 ntBASIC11.61□□□□□ -0.55
Ccl6P27784 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Ccl6P27784 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.61□□□□□ -0.55
Ccl6P27784 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Gm43195-201ENSMUST00000200614 2332 ntBASIC11.61□□□□□ -0.55
Ccl6P27784 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Ccl6P27784 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.61□□□□□ -0.55
Ccl6P27784 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC11.61□□□□□ -0.55
Ccl6P27784 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ccl6P27784 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ccl6P27784 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ccl6P27784 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Ccl6P27784 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ccl6P27784 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Gm13036-201ENSMUST00000117799 748 ntBASIC11.6□□□□□ -0.55
Ccl6P27784 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Gm18195-201ENSMUST00000207604 706 ntBASIC11.6□□□□□ -0.55
Ccl6P27784 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.6□□□□□ -0.55
Ccl6P27784 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC11.6□□□□□ -0.55
Ccl6P27784 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ccl6P27784 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ccl6P27784 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Ccl6P27784 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.6□□□□□ -0.55
Ccl6P27784 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.6□□□□□ -0.55
Ccl6P27784 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.6□□□□□ -0.55
Ccl6P27784 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ccl6P27784 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.6□□□□□ -0.55
Ccl6P27784 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ccl6P27784 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl6P27784 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl6P27784 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Ccl6P27784 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ccl6P27784 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms