Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cd40lgP27548 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cd40lgP27548 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cd40lgP27548 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.75□□□□□ -0.21
Cd40lgP27548 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cd40lgP27548 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cd40lgP27548 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cd40lgP27548 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.75□□□□□ -0.21
Cd40lgP27548 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cd40lgP27548 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.75□□□□□ -0.21
Cd40lgP27548 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cd40lgP27548 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Cd40lgP27548 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cd40lgP27548 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cd40lgP27548 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cd40lgP27548 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cd40lgP27548 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.75□□□□□ -0.21
Cd40lgP27548 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.75□□□□□ -0.21
Cd40lgP27548 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cd40lgP27548 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.75□□□□□ -0.21
Cd40lgP27548 Gm8318-201ENSMUST00000182954 872 ntBASIC13.75□□□□□ -0.21
Cd40lgP27548 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.75□□□□□ -0.21
Cd40lgP27548 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cd40lgP27548 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cd40lgP27548 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.75□□□□□ -0.21
Cd40lgP27548 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cd40lgP27548 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cd40lgP27548 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cd40lgP27548 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cd40lgP27548 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cd40lgP27548 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Cd40lgP27548 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cd40lgP27548 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cd40lgP27548 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cd40lgP27548 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cd40lgP27548 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.74□□□□□ -0.21
Cd40lgP27548 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.74□□□□□ -0.21
Cd40lgP27548 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Cd40lgP27548 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cd40lgP27548 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Cd40lgP27548 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.74□□□□□ -0.21
Cd40lgP27548 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cd40lgP27548 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cd40lgP27548 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.74□□□□□ -0.21
Cd40lgP27548 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cd40lgP27548 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.74□□□□□ -0.21
Cd40lgP27548 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Cd40lgP27548 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.74□□□□□ -0.21
Cd40lgP27548 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cd40lgP27548 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cd40lgP27548 Gm9727-201ENSMUST00000161387 555 ntBASIC13.74□□□□□ -0.21
Cd40lgP27548 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.74□□□□□ -0.21
Cd40lgP27548 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.74□□□□□ -0.21
Cd40lgP27548 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.74□□□□□ -0.21
Cd40lgP27548 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cd40lgP27548 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cd40lgP27548 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cd40lgP27548 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cd40lgP27548 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cd40lgP27548 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cd40lgP27548 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cd40lgP27548 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cd40lgP27548 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cd40lgP27548 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cd40lgP27548 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cd40lgP27548 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cd40lgP27548 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Cd40lgP27548 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cd40lgP27548 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cd40lgP27548 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cd40lgP27548 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cd40lgP27548 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cd40lgP27548 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cd40lgP27548 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.73□□□□□ -0.21
Cd40lgP27548 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cd40lgP27548 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cd40lgP27548 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cd40lgP27548 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cd40lgP27548 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.73□□□□□ -0.21
Cd40lgP27548 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cd40lgP27548 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Cd40lgP27548 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cd40lgP27548 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cd40lgP27548 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cd40lgP27548 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Cd40lgP27548 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.73□□□□□ -0.21
Cd40lgP27548 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Cd40lgP27548 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cd40lgP27548 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.73□□□□□ -0.21
Cd40lgP27548 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.73□□□□□ -0.21
Cd40lgP27548 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cd40lgP27548 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Cd40lgP27548 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cd40lgP27548 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cd40lgP27548 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Cd40lgP27548 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cd40lgP27548 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cd40lgP27548 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cd40lgP27548 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cd40lgP27548 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms