Protein–RNA interactions for Protein: P27048

Snrpb, Small nuclear ribonucleoprotein-associated protein B, mousemouse

Known RBP Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpbP27048 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SnrpbP27048 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SnrpbP27048 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SnrpbP27048 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
SnrpbP27048 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SnrpbP27048 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SnrpbP27048 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SnrpbP27048 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SnrpbP27048 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SnrpbP27048 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SnrpbP27048 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SnrpbP27048 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SnrpbP27048 AC154849.3-201ENSMUST00000223733 1660 ntBASIC13.13□□□□□ -0.31
SnrpbP27048 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC13.13□□□□□ -0.31
SnrpbP27048 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.13□□□□□ -0.31
SnrpbP27048 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC13.13□□□□□ -0.31
SnrpbP27048 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SnrpbP27048 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SnrpbP27048 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.13□□□□□ -0.31
SnrpbP27048 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.13□□□□□ -0.31
SnrpbP27048 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SnrpbP27048 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SnrpbP27048 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SnrpbP27048 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
SnrpbP27048 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SnrpbP27048 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SnrpbP27048 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.13□□□□□ -0.31
SnrpbP27048 Celf4-206ENSMUST00000224553 1729 ntBASIC13.13□□□□□ -0.31
SnrpbP27048 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SnrpbP27048 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SnrpbP27048 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
SnrpbP27048 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SnrpbP27048 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SnrpbP27048 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SnrpbP27048 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SnrpbP27048 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SnrpbP27048 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SnrpbP27048 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SnrpbP27048 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SnrpbP27048 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
SnrpbP27048 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.12□□□□□ -0.31
SnrpbP27048 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.12□□□□□ -0.31
SnrpbP27048 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SnrpbP27048 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SnrpbP27048 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Gm25318-201ENSMUST00000122554 314 ntBASIC13.12□□□□□ -0.31
SnrpbP27048 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.12□□□□□ -0.31
SnrpbP27048 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.12□□□□□ -0.31
SnrpbP27048 Gm6623-201ENSMUST00000173570 544 ntBASIC13.12□□□□□ -0.31
SnrpbP27048 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.12□□□□□ -0.31
SnrpbP27048 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.12□□□□□ -0.31
SnrpbP27048 Gm19164-201ENSMUST00000210667 640 ntBASIC13.12□□□□□ -0.31
SnrpbP27048 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 AC154828.2-201ENSMUST00000220908 1070 ntBASIC13.12□□□□□ -0.31
SnrpbP27048 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SnrpbP27048 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
SnrpbP27048 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SnrpbP27048 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.12□□□□□ -0.31
SnrpbP27048 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
SnrpbP27048 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
SnrpbP27048 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
SnrpbP27048 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.11□□□□□ -0.31
SnrpbP27048 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.11□□□□□ -0.31
SnrpbP27048 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SnrpbP27048 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SnrpbP27048 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SnrpbP27048 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
SnrpbP27048 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SnrpbP27048 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.11□□□□□ -0.31
SnrpbP27048 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SnrpbP27048 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.11□□□□□ -0.31
SnrpbP27048 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SnrpbP27048 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SnrpbP27048 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms