Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Col8a2P25318 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.43□□□□□ -0.42
Col8a2P25318 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.43□□□□□ -0.42
Col8a2P25318 Gm43767-201ENSMUST00000198933 381 ntBASIC12.43□□□□□ -0.42
Col8a2P25318 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC12.43□□□□□ -0.42
Col8a2P25318 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Col8a2P25318 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col8a2P25318 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.43□□□□□ -0.42
Col8a2P25318 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.43□□□□□ -0.42
Col8a2P25318 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col8a2P25318 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col8a2P25318 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col8a2P25318 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col8a2P25318 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Col8a2P25318 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col8a2P25318 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col8a2P25318 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col8a2P25318 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col8a2P25318 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col8a2P25318 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col8a2P25318 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Col8a2P25318 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col8a2P25318 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.42□□□□□ -0.42
Col8a2P25318 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.42□□□□□ -0.42
Col8a2P25318 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col8a2P25318 Gm43125-201ENSMUST00000201724 730 ntBASIC12.42□□□□□ -0.42
Col8a2P25318 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.42□□□□□ -0.42
Col8a2P25318 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col8a2P25318 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.42□□□□□ -0.42
Col8a2P25318 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
Col8a2P25318 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col8a2P25318 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Col8a2P25318 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col8a2P25318 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col8a2P25318 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.42□□□□□ -0.42
Col8a2P25318 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col8a2P25318 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col8a2P25318 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Col8a2P25318 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col8a2P25318 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col8a2P25318 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col8a2P25318 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.42□□□□□ -0.42
Col8a2P25318 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Col8a2P25318 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col8a2P25318 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Col8a2P25318 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 Carlr-201ENSMUST00000181515 2574 ntBASIC12.41□□□□□ -0.42
Col8a2P25318 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Col8a2P25318 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.41□□□□□ -0.42
Col8a2P25318 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Col8a2P25318 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.41□□□□□ -0.42
Col8a2P25318 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.41□□□□□ -0.42
Col8a2P25318 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.41□□□□□ -0.42
Col8a2P25318 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.41□□□□□ -0.42
Col8a2P25318 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Col8a2P25318 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.41□□□□□ -0.42
Col8a2P25318 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col8a2P25318 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.41□□□□□ -0.42
Col8a2P25318 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
Col8a2P25318 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Col8a2P25318 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Col8a2P25318 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Col8a2P25318 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms