Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
BdnfP21237 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BdnfP21237 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BdnfP21237 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC14.29□□□□□ -0.12
BdnfP21237 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
BdnfP21237 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BdnfP21237 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.29□□□□□ -0.12
BdnfP21237 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BdnfP21237 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BdnfP21237 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.29□□□□□ -0.12
BdnfP21237 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.29□□□□□ -0.12
BdnfP21237 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.29□□□□□ -0.12
BdnfP21237 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BdnfP21237 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.29□□□□□ -0.12
BdnfP21237 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BdnfP21237 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BdnfP21237 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BdnfP21237 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.29□□□□□ -0.12
BdnfP21237 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BdnfP21237 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BdnfP21237 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.29□□□□□ -0.12
BdnfP21237 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BdnfP21237 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BdnfP21237 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
BdnfP21237 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BdnfP21237 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
BdnfP21237 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BdnfP21237 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BdnfP21237 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BdnfP21237 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BdnfP21237 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BdnfP21237 Gm15358-201ENSMUST00000119249 520 ntBASIC14.28□□□□□ -0.12
BdnfP21237 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.28□□□□□ -0.12
BdnfP21237 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BdnfP21237 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.28□□□□□ -0.12
BdnfP21237 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BdnfP21237 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BdnfP21237 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BdnfP21237 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC14.28□□□□□ -0.12
BdnfP21237 Gm21362-201ENSMUST00000194272 928 ntBASIC14.28□□□□□ -0.12
BdnfP21237 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BdnfP21237 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.28□□□□□ -0.12
BdnfP21237 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BdnfP21237 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BdnfP21237 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
BdnfP21237 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BdnfP21237 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BdnfP21237 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BdnfP21237 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
BdnfP21237 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
BdnfP21237 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
BdnfP21237 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
BdnfP21237 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
BdnfP21237 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
BdnfP21237 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
BdnfP21237 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
BdnfP21237 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BdnfP21237 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
BdnfP21237 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
BdnfP21237 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
BdnfP21237 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
BdnfP21237 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
BdnfP21237 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
BdnfP21237 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.27□□□□□ -0.12
BdnfP21237 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
BdnfP21237 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
BdnfP21237 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.27□□□□□ -0.13
BdnfP21237 Gm28033-201ENSMUST00000184224 96 ntBASIC14.27□□□□□ -0.13
BdnfP21237 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.27□□□□□ -0.13
BdnfP21237 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BdnfP21237 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.27□□□□□ -0.13
BdnfP21237 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
BdnfP21237 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BdnfP21237 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BdnfP21237 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BdnfP21237 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BdnfP21237 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BdnfP21237 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
BdnfP21237 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
BdnfP21237 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
BdnfP21237 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
BdnfP21237 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
BdnfP21237 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
BdnfP21237 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
BdnfP21237 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.26□□□□□ -0.13
BdnfP21237 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
BdnfP21237 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms