Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfrsf9P20334 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf9P20334 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf9P20334 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf9P20334 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Tnfrsf9P20334 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf9P20334 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf9P20334 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf9P20334 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf9P20334 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf9P20334 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf9P20334 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf9P20334 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf9P20334 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf9P20334 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf9P20334 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf9P20334 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Tnfrsf9P20334 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.21□□□□□ -0.46
Tnfrsf9P20334 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Tnfrsf9P20334 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Gm11434-201ENSMUST00000122379 629 ntBASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Gm5745-201ENSMUST00000183748 313 ntBASIC12.2□□□□□ -0.46
Tnfrsf9P20334 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.2□□□□□ -0.46
Tnfrsf9P20334 AC154572.2-201ENSMUST00000225105 997 ntBASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Tnfrsf9P20334 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Gm13365-201ENSMUST00000121188 973 ntBASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Gm13597-201ENSMUST00000121239 375 ntBASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Gm36967-201ENSMUST00000193814 266 ntBASIC12.19□□□□□ -0.46
Tnfrsf9P20334 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.19□□□□□ -0.46
Tnfrsf9P20334 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms