Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc9P09633 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc9P09633 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc9P09633 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc9P09633 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC19.18■□□□□ 0.66
Hoxc9P09633 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
Hoxc9P09633 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc9P09633 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc9P09633 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc9P09633 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc9P09633 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxc9P09633 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Hoxc9P09633 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Hoxc9P09633 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc9P09633 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc9P09633 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc9P09633 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc9P09633 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Hoxc9P09633 Ldb3-207ENSMUST00000227819 1499 ntBASIC19.17■□□□□ 0.66
Hoxc9P09633 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc9P09633 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc9P09633 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC19.17■□□□□ 0.66
Hoxc9P09633 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC19.17■□□□□ 0.66
Hoxc9P09633 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC19.17■□□□□ 0.66
Hoxc9P09633 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Hoxc9P09633 Mir125a-201ENSMUST00000083545 68 ntBASIC19.17■□□□□ 0.66
Hoxc9P09633 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc9P09633 Gm5357-201ENSMUST00000212720 1924 ntBASIC19.17■□□□□ 0.66
Hoxc9P09633 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Hoxc9P09633 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc9P09633 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxc9P09633 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC19.17■□□□□ 0.66
Hoxc9P09633 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Hoxc9P09633 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc9P09633 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc9P09633 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc9P09633 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc9P09633 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hoxc9P09633 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc9P09633 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc9P09633 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC19.16■□□□□ 0.66
Hoxc9P09633 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc9P09633 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hoxc9P09633 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc9P09633 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc9P09633 Gm7820-201ENSMUST00000121012 1052 ntBASIC19.16■□□□□ 0.66
Hoxc9P09633 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC19.16■□□□□ 0.66
Hoxc9P09633 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc9P09633 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC19.16■□□□□ 0.66
Hoxc9P09633 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc9P09633 AC154239.3-201ENSMUST00000226933 674 ntBASIC19.16■□□□□ 0.66
Hoxc9P09633 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Hoxc9P09633 Gm6180-201ENSMUST00000065243 498 ntBASIC19.16■□□□□ 0.66
Hoxc9P09633 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc9P09633 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc9P09633 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc9P09633 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc9P09633 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc9P09633 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hoxc9P09633 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hoxc9P09633 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc9P09633 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Hoxc9P09633 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxc9P09633 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC19.16■□□□□ 0.66
Hoxc9P09633 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc9P09633 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc9P09633 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc9P09633 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc9P09633 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc9P09633 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc9P09633 Gm21854-201ENSMUST00000179901 471 ntBASIC19.15■□□□□ 0.66
Hoxc9P09633 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC19.15■□□□□ 0.66
Hoxc9P09633 AC130829.1-201ENSMUST00000221548 494 ntBASIC19.15■□□□□ 0.66
Hoxc9P09633 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc9P09633 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Hoxc9P09633 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc9P09633 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc9P09633 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc9P09633 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc9P09633 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc9P09633 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc9P09633 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc9P09633 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc9P09633 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc9P09633 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc9P09633 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxc9P09633 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Hoxc9P09633 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxc9P09633 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxc9P09633 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxc9P09633 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxc9P09633 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxc9P09633 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxc9P09633 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC19.14■□□□□ 0.65
Hoxc9P09633 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Hoxc9P09633 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC19.14■□□□□ 0.65
Hoxc9P09633 Gm23984-201ENSMUST00000157139 203 ntBASIC19.14■□□□□ 0.65
Hoxc9P09633 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxc9P09633 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Hoxc9P09633 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms