Protein–RNA interactions for Protein: P09084

Pax1, Paired box protein Pax-1, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pax1P09084 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pax1P09084 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pax1P09084 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pax1P09084 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pax1P09084 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pax1P09084 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Pax1P09084 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pax1P09084 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pax1P09084 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pax1P09084 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pax1P09084 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.12□□□□□ -0.47
Pax1P09084 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pax1P09084 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.12□□□□□ -0.47
Pax1P09084 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Pax1P09084 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.12□□□□□ -0.47
Pax1P09084 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.12□□□□□ -0.47
Pax1P09084 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC12.12□□□□□ -0.47
Pax1P09084 AC114573.1-201ENSMUST00000224120 1210 ntBASIC12.12□□□□□ -0.47
Pax1P09084 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pax1P09084 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pax1P09084 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.12□□□□□ -0.47
Pax1P09084 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pax1P09084 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.12□□□□□ -0.47
Pax1P09084 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pax1P09084 Cd59a-201ENSMUST00000040423 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.12□□□□□ -0.47
Pax1P09084 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pax1P09084 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.11□□□□□ -0.47
Pax1P09084 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pax1P09084 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Pax1P09084 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Pax1P09084 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.11□□□□□ -0.47
Pax1P09084 Olfr129-201ENSMUST00000122318 993 ntBASIC12.11□□□□□ -0.47
Pax1P09084 Gm8318-201ENSMUST00000182954 872 ntBASIC12.11□□□□□ -0.47
Pax1P09084 Gm36991-201ENSMUST00000191800 648 ntBASIC12.11□□□□□ -0.47
Pax1P09084 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Gm18622-201ENSMUST00000219361 595 ntBASIC12.11□□□□□ -0.47
Pax1P09084 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.11□□□□□ -0.47
Pax1P09084 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pax1P09084 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pax1P09084 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
Pax1P09084 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pax1P09084 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pax1P09084 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pax1P09084 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms