Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P06344 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
P06344 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
P06344 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P06344 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P06344 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
P06344 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
P06344 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
P06344 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P06344 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
P06344 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
P06344 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
P06344 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
P06344 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
P06344 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P06344 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P06344 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
P06344 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
P06344 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.26□□□□□ -0.29
P06344 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.26□□□□□ -0.29
P06344 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.26□□□□□ -0.29
P06344 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.26□□□□□ -0.29
P06344 Celf4-206ENSMUST00000224553 1729 ntBASIC13.26□□□□□ -0.29
P06344 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P06344 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P06344 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P06344 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P06344 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P06344 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
P06344 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.26□□□□□ -0.29
P06344 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P06344 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
P06344 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P06344 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
P06344 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
P06344 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P06344 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P06344 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
P06344 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
P06344 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P06344 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P06344 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P06344 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
P06344 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P06344 Gm11745-201ENSMUST00000121669 448 ntBASIC13.25□□□□□ -0.29
P06344 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.25□□□□□ -0.29
P06344 Gm20553-201ENSMUST00000204205 844 ntBASIC13.25□□□□□ -0.29
P06344 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.25□□□□□ -0.29
P06344 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P06344 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
P06344 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P06344 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
P06344 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
P06344 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
P06344 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.25□□□□□ -0.29
P06344 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
P06344 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P06344 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
P06344 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P06344 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06344 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06344 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
P06344 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P06344 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06344 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
P06344 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.24□□□□□ -0.29
P06344 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
P06344 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06344 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06344 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P06344 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06344 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
P06344 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.24□□□□□ -0.29
P06344 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
P06344 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06344 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
P06344 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P06344 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.24□□□□□ -0.29
P06344 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.24□□□□□ -0.29
P06344 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06344 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P06344 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06344 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06344 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
P06344 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06344 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.24□□□□□ -0.29
P06344 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
P06344 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06344 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
P06344 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.23□□□□□ -0.29
P06344 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
P06344 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
P06344 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms