Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.35□□□□□ -0.27
Hdac3O88895 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Hdac3O88895 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.35□□□□□ -0.27
Hdac3O88895 Gm44357-201ENSMUST00000195897 142 ntBASIC13.35□□□□□ -0.27
Hdac3O88895 Gm19658-201ENSMUST00000196231 138 ntBASIC13.35□□□□□ -0.27
Hdac3O88895 Gm44367-201ENSMUST00000196836 138 ntBASIC13.35□□□□□ -0.27
Hdac3O88895 Gm44350-201ENSMUST00000197197 138 ntBASIC13.35□□□□□ -0.27
Hdac3O88895 Gm44390-201ENSMUST00000197533 144 ntBASIC13.35□□□□□ -0.27
Hdac3O88895 Gm44313-201ENSMUST00000198018 138 ntBASIC13.35□□□□□ -0.27
Hdac3O88895 Gm44486-201ENSMUST00000198508 138 ntBASIC13.35□□□□□ -0.27
Hdac3O88895 Gm44314-201ENSMUST00000199263 138 ntBASIC13.35□□□□□ -0.27
Hdac3O88895 Gm44394-201ENSMUST00000199558 138 ntBASIC13.35□□□□□ -0.27
Hdac3O88895 Gm44484-201ENSMUST00000199873 138 ntBASIC13.35□□□□□ -0.27
Hdac3O88895 Gm44466-201ENSMUST00000200264 138 ntBASIC13.35□□□□□ -0.27
Hdac3O88895 Gm44359-201ENSMUST00000200671 138 ntBASIC13.35□□□□□ -0.27
Hdac3O88895 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Hdac3O88895 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdac3O88895 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdac3O88895 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hdac3O88895 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Hdac3O88895 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hdac3O88895 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdac3O88895 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.35□□□□□ -0.27
Hdac3O88895 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdac3O88895 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdac3O88895 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hdac3O88895 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hdac3O88895 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.34□□□□□ -0.27
Hdac3O88895 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Hdac3O88895 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hdac3O88895 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Hdac3O88895 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Hdac3O88895 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.34□□□□□ -0.27
Hdac3O88895 Gm11764-201ENSMUST00000120221 623 ntBASIC13.34□□□□□ -0.27
Hdac3O88895 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.34□□□□□ -0.27
Hdac3O88895 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.34□□□□□ -0.27
Hdac3O88895 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Gm28659-201ENSMUST00000188013 759 ntBASIC13.34□□□□□ -0.27
Hdac3O88895 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.34□□□□□ -0.27
Hdac3O88895 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Hdac3O88895 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Hdac3O88895 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdac3O88895 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Hdac3O88895 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hdac3O88895 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hdac3O88895 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Hdac3O88895 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Hdac3O88895 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Hdac3O88895 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.33□□□□□ -0.28
Hdac3O88895 Gm7230-201ENSMUST00000173026 815 ntBASIC13.33□□□□□ -0.28
Hdac3O88895 Gm27646-201ENSMUST00000183989 110 ntBASIC13.33□□□□□ -0.28
Hdac3O88895 Mir8098-201ENSMUST00000184011 137 ntBASIC13.33□□□□□ -0.28
Hdac3O88895 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.33□□□□□ -0.28
Hdac3O88895 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.33□□□□□ -0.28
Hdac3O88895 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.33□□□□□ -0.28
Hdac3O88895 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.33□□□□□ -0.28
Hdac3O88895 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.33□□□□□ -0.28
Hdac3O88895 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.33□□□□□ -0.28
Hdac3O88895 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.33□□□□□ -0.28
Hdac3O88895 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdac3O88895 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Hdac3O88895 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.33□□□□□ -0.28
Hdac3O88895 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms