Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC10.56□□□□□ -0.72
Sh2d1aO88890 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Gm17971-201ENSMUST00000190239 806 ntBASIC10.56□□□□□ -0.72
Sh2d1aO88890 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC10.56□□□□□ -0.72
Sh2d1aO88890 AC159106.1-201ENSMUST00000224421 690 ntBASIC10.56□□□□□ -0.72
Sh2d1aO88890 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Sh2d1aO88890 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Sh2d1aO88890 AC159649.2-201ENSMUST00000222984 3223 ntBASIC10.56□□□□□ -0.72
Sh2d1aO88890 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC10.56□□□□□ -0.72
Sh2d1aO88890 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Gm15173-201ENSMUST00000122049 433 ntBASIC10.55□□□□□ -0.72
Sh2d1aO88890 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC10.55□□□□□ -0.72
Sh2d1aO88890 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Gm8318-201ENSMUST00000182954 872 ntBASIC10.55□□□□□ -0.72
Sh2d1aO88890 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Sh2d1aO88890 AC154757.1-201ENSMUST00000228289 336 ntBASIC10.55□□□□□ -0.72
Sh2d1aO88890 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Gm8242-201ENSMUST00000193029 1420 ntBASIC10.55□□□□□ -0.72
Sh2d1aO88890 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Sh2d1aO88890 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sh2d1aO88890 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sh2d1aO88890 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Gm11185-201ENSMUST00000117732 1007 ntBASIC10.54□□□□□ -0.72
Sh2d1aO88890 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC10.54□□□□□ -0.72
Sh2d1aO88890 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Gm10499-201ENSMUST00000174094 934 ntBASIC10.54□□□□□ -0.72
Sh2d1aO88890 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Sh2d1aO88890 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms