Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a20bO88575 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a20bO88575 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Slc6a20bO88575 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Gm9002-201ENSMUST00000178437 499 ntBASIC16.15■□□□□ 0.18
Slc6a20bO88575 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slc6a20bO88575 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Slc6a20bO88575 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Slc6a20bO88575 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a20bO88575 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.14■□□□□ 0.17
Slc6a20bO88575 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.14■□□□□ 0.17
Slc6a20bO88575 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Gm45453-201ENSMUST00000211758 853 ntBASIC16.14■□□□□ 0.17
Slc6a20bO88575 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slc6a20bO88575 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a20bO88575 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a20bO88575 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a20bO88575 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.13■□□□□ 0.17
Slc6a20bO88575 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a20bO88575 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Slc6a20bO88575 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC16.13■□□□□ 0.17
Slc6a20bO88575 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a20bO88575 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Slc6a20bO88575 Gm45098-201ENSMUST00000207179 657 ntBASIC16.13■□□□□ 0.17
Slc6a20bO88575 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.13■□□□□ 0.17
Slc6a20bO88575 AC162801.1-201ENSMUST00000220612 198 ntBASIC16.13■□□□□ 0.17
Slc6a20bO88575 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.13■□□□□ 0.17
Slc6a20bO88575 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Slc6a20bO88575 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.13■□□□□ 0.17
Slc6a20bO88575 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a20bO88575 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a20bO88575 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.13■□□□□ 0.17
Slc6a20bO88575 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a20bO88575 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a20bO88575 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a20bO88575 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Slc6a20bO88575 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Slc6a20bO88575 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a20bO88575 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a20bO88575 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.13■□□□□ 0.17
Slc6a20bO88575 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slc6a20bO88575 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a20bO88575 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Slc6a20bO88575 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a20bO88575 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Slc6a20bO88575 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.12■□□□□ 0.17
Slc6a20bO88575 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a20bO88575 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.12■□□□□ 0.17
Slc6a20bO88575 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a20bO88575 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a20bO88575 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Slc6a20bO88575 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a20bO88575 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a20bO88575 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a20bO88575 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Slc6a20bO88575 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Slc6a20bO88575 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms