Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.78□□□□□ -0.36
Cldn1O88551 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.78□□□□□ -0.36
Cldn1O88551 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Cldn1O88551 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Cldn1O88551 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cldn1O88551 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn1O88551 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn1O88551 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn1O88551 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn1O88551 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn1O88551 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn1O88551 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Cldn1O88551 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn1O88551 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn1O88551 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn1O88551 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn1O88551 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cldn1O88551 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Cldn1O88551 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cldn1O88551 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn1O88551 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cldn1O88551 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn1O88551 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn1O88551 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn1O88551 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn1O88551 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cldn1O88551 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn1O88551 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cldn1O88551 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cldn1O88551 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn1O88551 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Cldn1O88551 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn1O88551 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn1O88551 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn1O88551 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cldn1O88551 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Cldn1O88551 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn1O88551 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.76□□□□□ -0.37
Cldn1O88551 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn1O88551 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn1O88551 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn1O88551 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn1O88551 Sybu-209ENSMUST00000228639 4113 ntBASIC12.76□□□□□ -0.37
Cldn1O88551 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn1O88551 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn1O88551 Gm6973-201ENSMUST00000117080 721 ntBASIC12.76□□□□□ -0.37
Cldn1O88551 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.76□□□□□ -0.37
Cldn1O88551 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.76□□□□□ -0.37
Cldn1O88551 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn1O88551 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn1O88551 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Cldn1O88551 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn1O88551 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn1O88551 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cldn1O88551 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn1O88551 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn1O88551 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn1O88551 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cldn1O88551 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.76□□□□□ -0.37
Cldn1O88551 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Cldn1O88551 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn1O88551 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn1O88551 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn1O88551 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn1O88551 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn1O88551 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn1O88551 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.76□□□□□ -0.37
Cldn1O88551 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn1O88551 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cldn1O88551 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Cldn1O88551 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cldn1O88551 Gm13453-201ENSMUST00000118708 357 ntBASIC12.75□□□□□ -0.37
Cldn1O88551 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms